Table 2.
Genes of interest differentially expressed in vegetative/reproductive (id1 versus WT) immature (IL) and mature (ML) B73 leaves
| Gene identifier | Gene annotation | Log2 fold change (vegetative/ reproductive) | ID1-binding site ≤2 kb upstream? |
|---|---|---|---|
| B73 ILs | |||
| GRMZM2G069146 | AP2-EREBP115 | –2.04479 | No |
| AC206951.3_FG017 | AP2-EREBP182 | –1.29962 | Yes |
| GRMZM2G177220 | ARR B6 | –0.6696 | No |
| GRMZM2G367834 | CCT-Like | –0.479088 | Yes |
| GRMZM2G162505 | Chitinase2 | 2.04718 | Yes |
| GRMZM2G076946 | Dhurrinase-like β-glucosidase | –9.89604 | Yes |
| GRMZM2G077015 | Dhurrinase-like β-glucosidase | 0 expression id1− | No |
| GRMZM2G014844 | Dhurrinase-like β-glucosidase | –0.744816 | No |
| GRMZM2G082520 | Expansin precursor | – 0.968866 | No |
| GRMZM2G052616 | GATA27 | –0.736017 | Yes |
| GRMZM2G011357 | ID1 | –3.06022 | No |
| GRMZM2G320287 | IDD7 | 1.26634 | Yes |
| GRMZM2G147716 | MADS67 | –5.10897 | Yes |
| GRMZM2G125441 | Protodermal factor 1 homologue | –0.600682 | Yes |
| GRMZM2G144782 | RING and CHY zinc finger protein | –1.70151 | No |
| GRMZM2G011078 | SCAMP | –2.75259 | No |
| GRMZM2G025459 | SNRK1 homolog | –0.912072 | No |
| GRMZM2G413006 | Xyloglucan GH16 | 0.839937 | Yes |
| GRMZM2G392125 | Xyloglucan GH16 | 0.903474 | No |
| GRMZM2G026980 | Xyloglucan GH16 (XET1) | –1.22364 | Yes |
| GRMZM2G038898 | Xyloglucan GT14 | –3.24967 | No |
| GRMZM2G116079 | Zinc finger family protein | –0.486814 | No |
| B73 MLs | |||
| GRMZM2G369472 | AP2-EREBP172 | –1.15875 | No |
| AC233935.1_FG005 | C2C2 zinc finger protein | 0.5426 | Yes |
| GRMZM2G400714 | C2H2 zinc finger protein | –0.900848 | No |
| GRMZM2G134023 | C3HC4 zinc finger protein | –0.635558 | No |
| AC225718.2_FG006 | Calcium-binding EF-hand | –0.631169 | No |
| GRMZM2G340807 | Calcium-binding EF-hand | –0.882565 | No |
| GRMZM2G106945 | Calmodulin-related protein | –1.27029 | No |
| GRMZM2G155370 | CCT-like | 0.519004 | Yes |
| GRMZM2G095598 | CCT-like | –0.481031 | No |
| GRMZM2G038783 | CCT-like | –0.580766 | No |
| GRMZM2G148772 | CCT-like | –0.706497 | No |
| GRMZM2G092363 | CCT-like | –0.926503 | Yes |
| GRMZM2G013398 | CCT-like | 0.756804 | No |
| GRMZM2G179024 | CCT-like | –0.466114 | No |
| GRMZM2G405368 | Conz1 | –0.872319 | Yes |
| GRMZM2G077015 | Dhurrinase-like β-glucosidase | –5.46369 | No |
| AC233870.1_FG003 | ELF3-like | –0.443462 | Yes |
| GRMZM2G171365 | MADS1 (SOC1 homologue) | 1.03822 | Yes |
| GRMZM2G347280 | TRPP1 (Trehalose6P phosphatase1) | 0.488956 | No |
| GRMZM2G068943 | TRPS1 (Trehalose6P synthase1) | –1.2737 | Yes |
| GRMZM5G871347 | WRKY93 | –0.93739 | No |
| GRMZM2G400167 | ZCN26 | 0.9708 | No |
Log2 fold change is reported, such that negative values represent an increase in reproductive plants. Transcripts in common with teosinte vegetative/reproductive plants are shown, with bold and italics fold change values representing congruent and opposite expression changes, respectively.