Table 1.
Dataset | Training data | Testing data | Sample overlap |
---|---|---|---|
BRCA | TCGA | TCGA | 539 |
Agilent 244K | Illumina HiSeq | ||
CRC | TCGA | TCGA | 186 |
Agilent | Illumina HiSeq | ||
CRC | KFSYSCC | TCGA | 0 |
Affymetrix HG133plus2 | Illumina HiSeq |
All data were derived from breast tissue samples (TCGA) analyzed by The Cancer Genome Atlas (2012) or colorectal cancer samples (TCGA, KFSYSCC) analyzed in Guinney et al. (2015).