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. 2018 Jan 17;34(11):1868–1874. doi: 10.1093/bioinformatics/bty026

Table 1.

Summary of training and testing gene expression datasets

Dataset Training data Testing data Sample overlap
BRCA TCGA TCGA 539
Agilent 244K Illumina HiSeq
CRC TCGA TCGA 186
Agilent Illumina HiSeq
CRC KFSYSCC TCGA 0
Affymetrix HG133plus2 Illumina HiSeq

All data were derived from breast tissue samples (TCGA) analyzed by The Cancer Genome Atlas (2012) or colorectal cancer samples (TCGA, KFSYSCC) analyzed in Guinney et al. (2015).