TABLE 1.
Site | Primary Culture* | Latex | Sens | ID | PCR | |||
---|---|---|---|---|---|---|---|---|
AAH | CBA | 35 - 37°C | 5 - 10% CO2 | 48Hrs | Wellcogen antigen test | ETest | MALDI-TOF | Manchester (Confirmation, typing and sensitivities) |
Choc | 35 - 37°C | 5 - 10% CO2 | 48Hrs | (if adult non blood stained WBC count > 5 /mm3) | ||||
(if neonate non blood stained WBC count >30) | ||||||||
RVH | CBA | 34 - 38°C | 5 - 10% CO2 | 48Hrs | Pastorex Meningitis Kit | ETest | MALDI-TOF or Vitek2 | Regional Virus Laboratory (RVL) [Confirmation, serogroup type]** |
Choc | 34 - 38°C | 5 - 10% CO2 | 48Hrs | (if WBC count abnormal) | ||||
CAH | CBA | 35.5°C | 5 - 10% CO2 | 48Hrs | None | Etest | API NH | Manchester (Confirmation, typing) |
Choc | 35.5°C | 5 - 10% CO2 | 48Hrs | RVL Virology if PCR requested on form | ||||
UH | CBA | 35 - 37°C | 5 - 10% CO2 | 48Hrs | Pastorex Meningitis Kit | Etest | Vitek2 | RVL [Confirmation, serogroup type] |
Choc | 35 - 37°C | 5 - 10% CO2 | 48Hrs | (if WBC count > 50 /mm3) |
Abbreviations: AAH=Antrim Area Hospital, CAH=Craigavon Area Hospital, RVH = Royal Victoria Hospital, UH=Ulster Hospital, CBA = Columbia Blood Agar, Choc = Chocolate Agar
HSC Clinical Microbiology Laboratories in Northern Ireland base their SOPs off the UK Standards for Microbiology Investigations, Investigation of Cerebrospinal Fluid (SMI B27) which is produced in association with several groups including the Northern Ireland Microbiology Forum And Audit Group.
Current practice is for qPCR testing (ctrA TaqMan) to be performed in Belfast. Positives are all typed by qPCR (siaD TaqMan) with ctrA LAMP also used for confirmation, especially of “discrepant” results