Table 2.
Subtype specific gene lists
| Tumor-specific subtypes | Stroma-specific subtypes | ||||
|---|---|---|---|---|---|
| L1 | L2 | L6 | L3 | L4 | L5 |
| AGR2 | ADM | AKAP7 | ACTG2 | ADAMTS1 | ABCC8 |
| ALDOB | ANGPTL4 | ALB | CDH11 | C1orf162 | ADAMTSL2 |
| ANXA13 | C19orf33 | ANPEP | COL10A1 | CCL2, 19, 21 | C7 |
| AQP5 | CCNB2 | AQP8 | COL12A1 | CCR7 | CHGA |
| ARL14 | CDH3 | CEL | COL8A1 | CD2, CD3D, CD6, CD8A, CD36, CD48, CD52, CD69, CD79B, CD163, CD247 | COLEC11 |
| C4BPB | CDKN2A | CLPS | COLEC12 | CFD | CPE |
| CA2 | COL7A1 | CPA1 | GAS1 | CILP | F2RL2 |
| CDCA7 | CRABP2 | CPB1 | GREM1 | CXCL9, 10, 12 | FRZB |
| CTSE | CST6 | CTRC | LRRC17 | CXCR4 | G6PC2 |
| CYP3A5 | DCBLD2 | CTRL | MFAP5 | EVI2B | IAPP |
| DMBT1 | DHRS9 | GATM | MYH11 | FAM107A | NPTX2 |
| DPCR1 | DKK1 | KLK1 | PDGFRL | FCN1 | PAX6 |
| F5 | ENO2 | LEFTY1 | RGS16 | FOSB | PTGDS |
| FAM3D | IFI44L | LGALS2 | SCUBE2 | FPR1 | QPCT |
| GPX2 | IFIT1 | MT1G | SFRP2 | FYB | RAB26 |
| LGALS4 | IGF2BP3 | PLA2G1B | GIMAP7 | SCG5 | |
| MMP1 | IRX3 | PPY | GZMA | STMN2 | |
| NPC1L1 | ISG15 | PRSS3 | GZMB | THBS4 | |
| PGC | KRT7 | REG1A | HBB | ZBTB16 | |
| PIGR | LAMA3 | SERPINA5 | HLA-DQA1 | ||
| ST6GALNAC1 | LAMB3 | SLC30A2 | IL1B | ||
| TFF1 | LAMC2 | SLC3A1 | IL33 | ||
| TFF2 | MYEOV | TMED6 | IL6 | ||
| TFF3 | PHACTR3 | IL7R | |||
| VILL | PSCA | LTB | |||
| VNN1 | PTGS2 | S100A8 | |||
| VSIG2 | S100A4 | SCARA5 | |||
| SFN | SFRP1 | ||||
| SLC2A1 | SLIT3 | ||||
| SPRR3 | SPOCK2 | ||||
| UBE2C | SRGN | ||||