Table 7.
Mitochondrial cytochrome b sequences, which have been developed for molecular detection and identification (barcoding) of avian Plasmodium parasites
| Parasite subgenus and species | GenBank accession and lineage code (in parentheses)a | Referencesb |
|---|---|---|
| Haemamoeba | ||
| P. caloti | Not available | Not available |
| P. cathemerium | AY377128 (pSEIAUR01) | [123] |
| P. coturnixi | Not available | Not available |
| P. gallinaceum | AY099029 (pGALLUS01) | [124] |
| P. giovannolai | Not available | Not available |
| P. griffithsi | Not available | Not available |
| P. lutzi | KC138226 (pTFUS05) | [91] |
| P. matutinum | KY287235 (pLINN1) | [66] |
| P. parvulum | Not available | Not available |
| P. subpraecox | Not available | Not available |
| P. relictum | AF495571 (pSGS1), AY831748 (pGRW11), AY099041 (pGRW4), KC342644 (pLZFUS01), MG724747 (pPHCOL01) | [67, 71, 117] |
| P. tejerai | JX272844 (pSPMAG01) | [50] |
| Giovannolaia | ||
| P. anasum | Not available | Not available |
| P. circumflexum | AF495576 (pTURDUS1) | [67] |
| P. durae | Not available | Not available |
| P. fallax | Not available | Not available |
| P. formosanum | Not available | Not available |
| P. gabaldoni | Not available | Not available |
| P. garnhami | Not available | Not available |
| P. gundersi | Not available | Not available |
| P. hegneri | Not available | Not available |
| P. homocircumflexum | KC884250 (pCOLL4) | [35] |
| P. leanucleus | Not available | Not available |
| P. lophurae | Not available | Not available |
| P. polare | Not available | Not available |
| P. octamerium | Not available | Not available |
| P. pedioecetae | Not available | Not available |
| P. pinottii | Not available | Not available |
| Novyella | ||
| P. accipiteris | Not available | Not available |
| P. ashfordi | AF254962 (pGRW2) | [71] |
| P. bertii | Not available | Not available |
| P. columbae | Not available | Not available |
| P. delichoni | KU529943 (pCOLL6) | [72] |
| P. dissanaikei | Not available | Not available |
| P. forresteri | Not available | Not available |
| P. globularis | EU770151 (pANLA1) | [52] |
| P. hexamerium | Not available | Not available |
| P. homonucleophilum | KC342643 (pSW2) | [117] |
| P. homopolare | KJ482708 (pSOSP CA 3P) | [58] |
| P. kempi | Not available | Not available |
| P. lucens | FJ389156 (pCYOL2) | [55] |
| P. megaglobularis | EU770152 (pCYOL1) | [52] |
| P. multivacuolaris | FJ389157 (pANLA2) | [55] |
| P. nucleophilum | JX467689 (pEG01) | [114] |
| P. parahexamerium | FJ389155 (pALDI1) | [55] |
| P. paranucleophilum | Not available | Not available |
| P. rouxi | HM146901 (pPADOM16) | [68] |
| P. unalis | KC771247 (pTFUS06) | [49] |
| P. valkiunasi | Not available | Not available |
| P. vaughani | DQ847271 (pSYAT05) | [22] |
| Bennettinia | ||
| P. juxtanucleare | AB250415 (pGALLUS02) | [125] |
| Huffia | ||
| P. elongatum | DQ368381 (pGRW6); KT282462 (pERIRUB01) | [23, 120] |
| P. hermani | Not available | Not available |
| P. huffi | Not available | Not available |
| P. polymorphum | Not available | Not available |
aOnly DNA sequences, for which parasite species identity was supported by morphological analysis are included in this table
bReferences of articles containing discussion of molecular characterization and morphological features of parasite species