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. 2018 May 30;13(5):e0198085. doi: 10.1371/journal.pone.0198085

Table 2. Primer sequences, target genes, and cycling conditions for SYBR green RT-PCR.

Target gene Primer sequences
(5’–3’)
Reverse transcription Primary
denaturation
Amplification (40 cycles) Dissociation curve
(1 cycle)
Product
size (bp)
Accession no. References
Secondary denaturation Annealing
(optics on)
Extension Secondary denaturation Annealing
Final denaturation
β-actin F: CCACCGCAAATGCTTCTAAAC 50°C
30 min
94°C
5 min
94°C
15 s
51°C
30 s
72°C
30 s
94°C
1 min
55°C
1 min
94°C
1 min
175 NM205518 [47]
R: AAGACTGCTGCTGACACCTTC
ACC F: AATGGCAGCTTTGGAGGTGT 60.9°C
30 s
60.9°C
1 min
119 NM_205505 [48]
R: TCTGTTTGGGTGGGAGGTG
CPT1 F: CAATGAGGTACTCCCTGAAA 57.5°C
30 s
57.5°C
1 min
337 AY675193
R: CATTATTGGTCCACGCCCTC
PEPT1 F: CCCCTGAGGAGGATCACTGTT 60°C
30 s
60°C
1 min
205 NM_204365 [49]
R: CAAAAGAGCAGCAGCAACGA
GLUT2 F: CACACTATGGGCGCATGCT 60°C
30 s
60°C
1 min
116 NM_207178.1
R: ATTGTCCCTGGAGGTGTTGGTG

β-actin, Beta actin; ACC, acetyl-CoA carboxylase; CPT1, carnitine acyltransferase I; PEPT1, peptide transporter 1; GLUT2, glucose transporter 2.