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. 2018 May 30;8:8361. doi: 10.1038/s41598-018-26672-2

Table 1.

Summary of the diversity of the studied loci.

locus length (bp) n % S S/1000 bp h AA Hd k π × 103
TLR1 1126 81 47.2 24 21.31 16 12 0.851 6.387 5.67
TLR2 2351 85 99.9 57 24.25 32 26 0.804 9.116 3.80
TLR4 2162 81 86.3 211 9.71 16 11 0.771 2.708 1.25
TLR5 2260 86 86.3 391 17.3 19 10 0.837 7.403 3.28
TLR6 1234 85 51.0 20 16.21 12 8 0.811 5.464 4.43
TLR7 2948 86 93.6 5 1.7 6 2 0.347 0.375 0.13
TLR9 2962 83 95.8 11 3.71 9 2 0.753 3.372 1.14

Length of the genotyped sequence in bp and % – percent of protein-coding sequence covered by genotyping are given. n – number of genotyped individuals, S – number of variable sites, h – number of haplotypes, AA – number of amino-acid alleles (unique translated sequences), Hd – haplotype diversity, k – average number of nucleotide differences, π – nucleotide diversity per site. 1Including an indel.