TABLE 1 .
Substitution | Restoration of ΔsagS biofilm-related phenotypes to wild-type levels |
|
---|---|---|
Attachment | Susceptibility to tobramycin | |
I103 | Yes | Yes |
D105 | Yes | No |
A112 | Yes | No |
S113 | Yes | Yes |
R116 | Intermediate | Yes |
R124 | Yes | Yes |
L126 | Yes | No |
S127 | Yes | No |
D128 | Yes | No |
L130 | Yes | Yes |
F131 | No | Yes |
G132b | No | No |
K134 | Yes | Yes |
L141 | Yes | Intermediate |
G152 | Yes | Intermediate |
L154 | No | Yes |
L156b | No | No |
D159 | Yes | No |
D166 | Yes | No |
F167 | Yes | Intermediate |
I173 | Yes | Intermediate |
S177 | Yes | Yes |
V180 | Intermediate | Yes |
S182 | No | Yes |
L183 | Yes | No |
L185 | Intermediate | Yes |
L187 | Yes | No |
L189b | No | Intermediate |
V191 | Yes | Yes |
L197 | Yes | Intermediate |
T198 | Yes | Yes |
L204 | Yes | No |
Q206 | Yes | No |
L208 | No | Yes |
D212 | Yes | Yes |
P213 | Yes | No |
R218 | Yes | Yes |
L221 | Yes | No |
R218 | Yes | Intermediate |
LILLV | No | Yes |
LTKPLVSLIQALb | No | No |
IDT | Yes | No |
LASASR | Intermediate | Yes |
RPLSDFL | Yes | No |
ITLLSG | Yes | Intermediate |
Phenotypic characterization was based on attachment capabilities and susceptibility of biofilms to tobramycin. Wild-type and ΔsagS mutant strains were used as controls. SagS variants with substitutions with underlined residues were chosen for further analyses (see Fig. 4, 5, and 7). Attachment phenotypes correspond to data shown in Fig. 3, while the susceptibility phenotypes are based on data shown in Fig. 6. “Yes” indicates no significant difference from PAO1, “No” indicates significantly different from PAO1, and “Intermediate” indicates significantly different, but values were in between those obtained for PAO1 or the ΔsagS/pMJT-sagS and ΔsagS mutants.
These SagS variants failed to restore both attachment and susceptibility phenotypes by ΔsagS mutant biofilms to wild-type levels, so the respective variants were excluded from subsequent analyses.