Table 5. Cap18 derivatives identified in the screening with lost antimicrobial activity or changed species-specificity.
Cap18 variant peptides | Antimicrobial Activity–MIC in μg/ml | ||||||
---|---|---|---|---|---|---|---|
Amino Acid | Position | Peptide Class | Mutation | L. lactis | S. Typhimurium | Y. ruckeri | A. salmonicida |
L | 6 | II | L6D | 16 | 8 | ≥32 | 16 |
II | L6P* | 8 | 4 | ≥32 | 8 | ||
II | L6R | ≥32 | 8 | 16 | 16 | ||
R | 10 | II | R10L* | ≥32 | 4 | 8 | 4 |
I | 13 | I | I13D* | ≥32 | ≥32 | ≥32 | ≥32 |
I | I13F* | ≥32 | ≥32 | ≥32 | ≥32 | ||
II | I13H* | ≥32 | 8 | 8 | 4 | ||
II | I13N | ≥32 | 8 | - | 8 | ||
II | I13Q* | ≥32 | 4 | ≥32 | 4 | ||
II | I13S* | 8 | 4 | ≥32 | 2 | ||
K | 16 | II | K16C* | ≥32 | 8 | 2 | 4 |
II | K16F* | ≥32 | 8 | 4 | 4 | ||
II | K16I* | ≥32 | 4 | 4 | 4 | ||
II | K16L* | ≥32 | 4 | 4 | 4 | ||
II | K16M* | ≥32 | 4 | 4 | 4 | ||
II | K16Y* | ≥32 | 8 | 8 | 4 | ||
L | 17 | II | L17C | ≥32 | 8 | ? | 8 |
I | L17D* | ≥32 | ≥32 | ≥32 | ≥32 | ||
II | L17H | ≥32 | 8 | ≥32 | 8 | ||
II | L17K* | ≥32 | 4 | ≥32 | 4 | ||
I | L17P* | ≥32 | ≥32 | ≥32 | ≥32 | ||
K | 18 | II | K18P* | ≥32 | 4 | ≥32 | 2 |
I | 20 | II | I20E* | ≥32 | 4 | 16 | 8 |
II | I20H* | ≥32 | 2 | 8 | 2 | ||
II | I20N* | ≥32 | 4 | 16 | 4 | ||
II | I20Q | ≥32 | 8 | 8 | 8 | ||
II | I20R | ≥32 | 8 | 16 | 16 | ||
G | 21 | II | G21C* | ≥32 | 8 | 4 | 4 |
II | G21I | ≥32 | 8 | 8 | 8 | ||
II | G21L* | ≥32 | 8 | 4 | 4 | ||
I | 24 | II | I24C* | ≥32 | 4 | 4 | 4 |
I | I24D* | ≥32 | ≥32 | ≥32 | ≥32 | ||
I | I24E | ≥32 | ≥32 | ≥32 | ≥32 | ||
II | I24G* | ≥32 | 4 | 16 | 8 | ||
II | I24H | ≥32 | 8 | ≥32 | 8 | ||
I | I24N* | ≥32 | ≥32 | ≥32 | ≥32 | ||
II | I24S* | ≥32 | 4 | 16 | 8 | ||
L | 27 | II | L27P* | ≥32 | 4 | 16 | 16 |
L | 31 | II | L31C | 8 | ≥32 | 4 | 4 |
T | 35 | II | T35H | 8 | ≥32 | 2 | 2 |
Y | 37 | II | Y37D | 8 | ≥32 | 2 | 2 |
Class I peptides are highlighted in light grey and class II peptides are shown in dark grey. Cap18 variant peptides chosen for further analysis using pure peptides (purity >95%) are marked with *.