3C	chromosome conformation capture
4C	circularized chromosome conformation capture
AR	Androgen Receptor
CNAs	Copy Number Alterations
CPC-GENE	Canadian CaP Genome Network
CR-NEPC	castration resistant neuroendocrine prostate cancer
CRPC	castration resistant prostate adenocarcinoma
DDR	Damage Repair
DSB	double-strand break
EGFR	epidermal growth factor receptor
FA	Fanconi anemia
FISH	fluorescent in-situ hybridization
HBOC	hereditary breast and ovarian cancer
HBOC	ovarian cancer
HPC	hereditary Prostate Cancer
HR	homologous recombination
HR	homologous recombination
ICGC	International Cancer Genome Consortium
LS MAPK	Lynch Syndrome Mitogen-activated protein kinase
MATCH	Molecular Analysis for Therapy Choice
mCRPC	metastatic castrate resistant prostate cancer
MMR	Mismatch Repair
MSI	microsatellite instability
NCI	National Cancer Institute
NGS NIH	Next-Gen sequencing National Institutes of Health
NHEJ	Non-homologous end joining
NSCLC	non-small-cell lung cancer
OMB PARP PI3K	Office of Management and Budget Poly (ADP-ribose) polymerase Phosphatidylinositol 3- kinase
PCF	Prostate Cancer Foundation
SEER SNPs	Surveillance, Epidemiology, and End Results single-nucleotide polymorphisms
SSA	single-strand annealing
SU2C	Stand Up to Cancer
TCGA	The Cancer Genome Atlas
TSG	tumor suppressor genes
WES	Whole exome sequencing