Table 1.

The detected significant Gene Ontology terms based on genes differentially expressed between pigs differing in terms of muscle mass.

GO Term	p-Value/Genes	Number of Genes Detected/Genes		Hp	Pi
Signal transduction	0.034	11		FC	FC
	ENSSSCG00000013901	IFI30	IFI30, lysosomal thiol reductase	1.82	1.37
	ENSSSCG00000009668	CLU	clusterin	1.92	1.45
	ENSSSCG00000028022	COL6A2	collagen type VI alpha 2 chain	1.71	1.36
	ENSSSCG00000022236	FOLR1	folate receptor 1 (adult)	2.01	1.53
	ENSSSCG00000022246	ICOSLG	inducible T-cell costimulator ligand	1.83	1.39
	ENSSSCG00000011129	ITIH5	inter-alpha-trypsin inhibitor heavy chain family member 5	1.67	1.38
	ENSSSCG00000000606	MGP	matrix Gla protein	2.04	1.30
	ENSSSCG00000026934	PIGX	phosphatidylinositol glycan anchor biosynthesis class X	1.27	1.36
	ENSSSCG00000027466	PCOLCE	procollagen C-endopeptidase enhancer	2.23	1.27
	ENSSSCG00000013181	SERPING1	serpin family G member 1	2.38	1.27
	ENSSSCG00000014834	UCP3	uncoupling protein 3	2.73	1.68
Nucleid acid binding	0.010	9
	ENSSSCG00000014834	UCP3	uncoupling protein 3	2.73	1.68
	ENSSSCG00000007830	RBBP6	RB binding protein 6, ubiquitin ligase	2.06	1.25
	ENSSSCG00000027060	TBX2	T-box 2	1.73	1.39
	ENSSSCG00000011332	SETD2	SET domain containing 2	1.87	1.27
	ENSSSCG00000006276	CEBPD	CCAAT/enhancer binding protein delta	2.57	1.38
	ENSSSCG00000027946	MVP	major vault protein	1.32	1.53
	ENSSSCG00000003670	RLF	rearranged L-myc fusion	1.80	1.25
	ENSSSCG00000026631	SLC25A6	solute carrier family 25 Member 6	1.73	1.35
	ENSSSCG00000028035	ZC3H11A	zinc finger CCCH-Type Containing 11A	2.73	1.68
Cytoplasm	0.032	5
	ENSSSCG00000025417	BBS2	Bardet-Biedl syndrome 2	1.37	1.35
	ENSSSCG00000009668	CLU	clusterin	1.92	1.45
	ENSSSCG00000017428	JUP	junction plakoglobin	1.31	1.39
	ENSSSCG00000004103	PCMT1	protein-L-isoaspartate (D-aspartate) O-methyltransferase	1.46	1.26
	ENSSSCG00000006066	RNF19A	ring finger protein 19A, RBR E3 ubiquitin protein ligase	2.10	1.31
Enzyme modulator	0.015	4
	ENSSSCG00000003201	ATF5	activating transcription factor 5	1.51	1.54
	ENSSSCG00000013181	SERPING1	serpin family G member 1	2.38	1.27
	ENSSSCG00000011129	ITIH5	inter-Alpha (Globulin) Inhibitor H5	1.67	1.38
	ENSSSCG00000013074	RAB3IL1	RAB3A Interacting Protein Like 1	2.16	1.59
Cytoskeleton	0,021	3
	ENSSSCG00000025417	BBS2	Bardet-Biedl syndrome 2	1.37	1.35
	ENSSSCG00000017428	JUP	junction plakoglobin	1.31	1.39
	ENSSSCG00000006066	RNF19A	ring finger protein 19A, RBR E3 ubiquitin protein ligase	2.10	1.31
Methyltransferase	0.0066	3
	ENSSSCG00000011332	SETD2	SET domain containing 2	1.87	1.27
	ENSSSCG00000015311	CYP51	cytochrome P450, family 51, subfamily A, polypeptide 1	2.27	1.41
	ENSSSCG00000004103	PCMT1	protein-L-isoaspartate (D-aspartate) O-methyltransferase	1.46	1.26

Hp—Hampshire; Pi—Pietrain; FC—fold change obtained for DEGs between different phenotypic groups in each breed.