Table III.
The 10 most upregulated and downregulated lncRNAs in high-grade ovarian serous cancer tissues compared with non-tumor tissues, compared by volcano plot.
| A, Upregulated lncRNAs
| |||||
|---|---|---|---|---|---|
| Seq. name | Gene symbol | Fold change Chromosome | Associated gene name | Associated protein name | |
| TCONS_12_00000435 | XLOC_l2_000324 | 81.26 | chr1 | ||
| NR_002947 | TCAM1P | 62.61 | chr17 | ||
| NR_002712 | CXCR2P1 | 45.67 | chr2 | ||
| uc002ywy.3 | AK027145 | 43.38 | chr21 | KCNJ15 | ATP-sensitive inward rectifier potassium channel 15 |
| ENST00000419814 | RP11-131J3.1 | 41.20 | chr1 | ||
| NR_027072 | LINC00189 | 38.96 | chr21 | ||
| ENST00000428667 | AP000695.4 | 36.94 | chr21 | CLDN14 C | laudin-14 |
| ENST00000470135 | RP5-884M6.1 | 35.52 | chr7 | ||
| ENST00000455309 | AC017002.1 | 27.37 | chr2 | ||
| ENST00000606457 | RP11-1C8.7 | 23.40 | chr8 | ||
|
| |||||
| B, Downregulated lncRNAs
| |||||
| Seq. name | Gene symbol | Fold change Chromosome | Associated gene name | Associated protein name | |
|
| |||||
| ENST00000556942 | RP11-356K23.1 | 1221.26 | chr14 | FOXN3 | Forkhead box protein N3 isoform 1 |
| ENST00000556942 | RP11-356K23.1 | 1221.26 | chr14 | FOXN3 | Forkhead box protein N3 isoform 2 |
| uc031qjg.1 | AK129935 | 845.63 | chr12 | ||
| ENST00000574178 | RP11-424M24.5 | 439.06 | chr16 | ||
| ENST00000584807 | WI2-1959D15.1 | 331.26 | chr9 | CR392000.1 | UniProtKB/TrEMBL or E7EUX6 |
| AL049990 | AL049990 | 330.93 | chr4 | ||
| NR_110114 | LOC101927668 | 324.98 | chr7 | ||
| NR_003063 | TUBA4B | 302.06 | chr2 | ||
| uc002xuq.1 | AK055386 | 239.29 | chr20 | ||
| NR_110916 | LINC01571 | 221.41 | chr16 | ||
LncRNA, long non-coding RNA.