Table VI.
A total of 10 cases of differentially expressed long non-coding RNAs (lincRNAs) and nearby coding gene pairs (distance <300 kb).
| LincRNAs
|
Nearby mRNAs
|
Nearby protein name | Direction (lncRNA-mRNA) | ||
|---|---|---|---|---|---|
| Seq. name | Gene symbol | Nearby gene | Nearby gene symbol | ||
| ENST00000412295 | CTC-338M12.9 | NM_033549 | TRIM41 | Tripartite motif containing 41 | Up-up |
| ENST00000412362 | RP11-236B18.2 | NM_014391 | ANKRD1 | Ankyrin repeat domain 1 (cardiac muscle) | Up-up |
| ENST00000412427 | RP11-380J14.1 | NM_022089 | ATP13A2 | ATPase type 13A2 | Up-up |
| AF070541 | AF070541 | NM_030632 | ASXL3 | Additional sex combs like 3, transcriptional regulator | Down-down |
| AF339807 | AF339807 | NM_015567 | SLITRK5 | SLIT and NTRK like family member 5 | Down-down |
| AK023372 | AK023372 | NM_000574 | CD55 | CD55 molecule (Cromer blood group) | Down-down |
| ENST00000413304 | AC098872.3 | NM_004657 | SDPR | Serum deprivation response | Dp-down |
| ENST00000417932 | RP11-10J5.1 | NM_022121 | PERP | PERP, TP53 apoptosis effector | Up-down |
| AK055324 | AK055324 | NM_005184 | CALM3 | Calmodulin 3 (phosphorylase kinase, delta) | Down-up |
| AL049990 | AL049990 | NM_024873 | TNIP3 | TNFAIP3 interacting protein 3 | Down-up |
LincRNA, long intergenic non-coding RNA.