Figure 3.
Alignment of Group IId and Group IIe WRKYs in T. chinensis and A. thaliana. Full-length WRKYs of Group IId and Group IIe were aligned together since they were considered as IId + e subgroup. WRKY domain was labeled by the solid line. CaMBD (Ca2 +-dependent CaM-binding domain) and Plant_zf_clust (plant zinc finger cluster, accession number in pfam was PF10533) domain were framed by solid box and dotted box respectively. HSF_DNA-bind (HSF-type DNA-binding, pfam00447) domain of TcWRKY57 was framed by grey box. LxxLL-motif was framed by red box. Sequence alignment was conducted by ClustalW, the figure was generated by DNAMAN 6.0. Different colors indicate sequence similarities: black indicated 100%, purple is 75%, green is 50%, yellow is 33%.