Table 3.
Characteristics of 26 cpSSR markers in 48 individuals of Platycladus orientalis (n = 24), Sabina chinensis (n = 8), Juniperus formosana (n = 8), and Cupressus torulosa (n = 8)
| Marker ID | Platycladus orientalis | Sabina chinensis | Juniperus formosana | Cupressus torulosa | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N a | N e | I | h | uh | N a | N e | I | h | uh | N a | N e | I | h | uh | N a | N e | I | h | uh | |
| N1* | 7 | 3.88 | 1.63 | 0.74 | 0.79 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 4 | 3.56 | 1.32 | 0.72 | 0.82 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N2* | 5 | 3.06 | 1.30 | 0.67 | 0.71 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 3 | 2.46 | 0.97 | 0.59 | 0.68 | 4 | 2.29 | 1.07 | 0.56 | 0.64 |
| N4# | 2 | 2.00 | 0.69 | 0.50 | 0.53 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 3 | 2.46 | 0.97 | 0.59 | 0.68 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N6~ | 5 | 3.61 | 1.40 | 0.72 | 0.76 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 4 | 3.56 | 1.32 | 0.72 | 0.82 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N8* | 4 | 2.17 | 0.98 | 0.54 | 0.56 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 3 | 1.68 | 0.74 | 0.41 | 0.46 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N9* | 4 | 2.72 | 1.14 | 0.63 | 0.68 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N10# | 2 | 1.92 | 0.67 | 0.48 | 0.51 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 5 | 4.57 | 1.56 | 0.78 | 0.89 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N11* | 2 | 1.60 | 0.56 | 0.38 | 0.40 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 4 | 3.56 | 1.32 | 0.72 | 0.82 | 3 | 2.13 | 0.90 | 0.53 | 0.61 |
| N13* | 4 | 3.43 | 1.29 | 0.71 | 0.74 | 3 | 2.13 | 0.90 | 0.53 | 0.61 | 3 | 2.13 | 0.90 | 0.53 | 0.61 | 2 | 1.60 | 0.56 | 0.38 | 0.43 |
| N14~ | 6 | 4.48 | 1.64 | 0.78 | 0.85 | 4 | 3.56 | 1.32 | 0.72 | 0.82 | 5 | 4.00 | 1.49 | 0.75 | 0.86 | 0 | 0.00 | 0.00 | 0.00 | 0.00 |
| N15^ | 6 | 5.00 | 1.70 | 0.80 | 0.89 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 5 | 4.00 | 1.49 | 0.75 | 0.86 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N16# | 3 | 2.46 | 0.97 | 0.59 | 0.63 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 5 | 4.00 | 1.49 | 0.75 | 0.86 | 2 | 1.60 | 0.56 | 0.38 | 0.43 |
| N18# | 3 | 2.46 | 0.97 | 0.59 | 0.63 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 5 | 3.20 | 1.39 | 0.69 | 0.79 | 2 | 1.60 | 0.56 | 0.38 | 0.43 |
| N19 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 6 | 5.33 | 1.73 | 0.81 | 0.93 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N20* | 3 | 2.46 | 0.97 | 0.59 | 0.63 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 5 | 4.57 | 1.56 | 0.78 | 0.89 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N22# | 2 | 1.80 | 0.64 | 0.44 | 0.46 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 4 | 2.91 | 1.21 | 0.66 | 0.75 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N23~ | 3 | 2.31 | 0.94 | 0.57 | 0.64 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N25# | 4 | 2.72 | 1.14 | 0.63 | 0.68 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 3 | 2.13 | 0.90 | 0.53 | 0.61 | 2 | 1.28 | 0.38 | 0.22 | 0.25 |
| N27* | 2 | 1.28 | 0.38 | 0.22 | 0.23 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 6 | 5.33 | 1.73 | 0.81 | 0.93 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N28~ | 4 | 1.81 | 0.89 | 0.45 | 0.49 | 3 | 1.68 | 0.74 | 0.41 | 0.46 | 5 | 4.57 | 1.56 | 0.78 | 0.89 | 0 | 0.00 | 0.00 | 0.00 | 0.00 |
| N29 | 2 | 1.13 | 0.23 | 0.12 | 0.13 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 3 | 2.46 | 0.97 | 0.59 | 0.68 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N31^ | 2 | 2.00 | 0.69 | 0.50 | 0.53 | 2 | 1.60 | 0.56 | 0.38 | 0.43 | 5 | 4.00 | 1.49 | 0.75 | 0.86 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N32~ | 5 | 4.26 | 1.51 | 0.77 | 0.82 | 5 | 3.20 | 1.39 | 0.69 | 0.79 | 6 | 4.57 | 1.67 | 0.78 | 0.89 | 0 | 0.00 | 0.00 | 0.00 | 0.00 |
| N33* | 5 | 4.24 | 1.52 | 0.76 | 0.83 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 4 | 2.91 | 1.21 | 0.66 | 0.75 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N34* | 2 | 2.00 | 0.69 | 0.50 | 0.53 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 3 | 2.91 | 1.08 | 0.66 | 0.75 | 1 | 1.00 | 0.00 | 0.00 | 0.00 |
| N35^ | 3 | 2.67 | 1.04 | 0.63 | 0.83 | 2 | 1.28 | 0.38 | 0.22 | 0.25 | 6 | 5.33 | 1.73 | 0.81 | 0.93 | 2 | 1.38 | 0.45 | 0.28 | 0.33 |
N a, observed number of alleles; N e, effective number of alleles; I, Shannon's information index; h, diversity; uh, unbiased diversity; *, #, ~, and ^ indicating polymorphic, monomorphic, low amplification rate, low specificity markers, respectively, characterized in a core breeding population of 192 individuals of P. orientalis.