Table 2.
Genomewide results based on the application of different methods on GENOA data.
| Chromosome | Gene Name | OMIM Number | Number of Variants | GAMuT (Projection) | GAMuT (Linear) | SKAT | MSKAT |
|---|---|---|---|---|---|---|---|
| 1 | EFCAB7 | – | 6 | 1.98E-05 | 0.010 | 0.325 | 1.33E-05 |
| 6 | ENPP3 | 602182 | 6 | 2.84E-05 | 0.009 | 0.431 | 3.66E-05 |
| 6 | NQO2 | 160998 | 5 | 0.001 | 0.007 | 0.061 | 2.63E-04 |
| 6 | FNDC1 | 609991 | 10 | 0.006 | 0.003 | 1.46E-05 | 0.005 |
| 7 | ZNF655 | – | 5 | 0.009 | 0.006 | 1.94E-04 | 0.009 |
| 19 | CD33 | 159590 | 5 | 1.85E-04 | 2.61E-05 | 5.25E-05 | 1.75E-04 |
| 19 | ZNF551 | – | 5 | 0.001 | 0.001 | 0.033 | 0.001 |
| 19 | ZNF667 | 611024 | 5 | 2.75E-04 | 0.008 | 0.005 | 2.55E-04 |
| 20 | COL9A3 | 120270 | 5 | 1.66E-05 | 1.85E-04 | 0.031 | 1.43E-05 |