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. 2018 May 31;8:8449. doi: 10.1038/s41598-018-26800-y

Table 2.

The various MM-PBSA terms for the binding of DENV serotypes to 513 and 4E11.

Contribution DENV1 DENV2 DENV3 DENV4(NC) DENV4(P)
513 4E11 513 4E11 513 4E11 513 4E11 513 4E11
*ΔEele −388 −436 −599 −515 −375 −466 −488 −375 −495 −356
(50) (31) (40) (31) (46) (35) (36) (33) (45) (35)
**ΔEvdW −120- −101 −93 −110 −100 −74 −102 −99 −95 −78
(6) (6) (6) (8) (7) (6) (8) (5) (6) (5)
***ΔGEPB 428 464 613 551 420 483 519 408 519 403
(41) (32) (36) (46) (40) (31) (33) (29) (37) (37)
$ΔGCavity −13 −11 −12 −13 −12 −11 −12 −11 −12 −11
(0.4) (0.3) (0.3) (0.4) (0.5) (0.3) (0.6) (0.3) (0.3) (0.5)
$$ΔGgas −509 −538 −692 −625 −408 −540 −590 −473 −590 −434
(47) (31) (39) (33) (40) (35) (37) (32) (44) (33)
#ΔGsol 415 452 601 537 475 472 506 396 506 392
(39) (35) (36) (32) (46) (31) (33) (28) (37) (33)
ˆΔGbind −94 −86 −90 −87 −67 −67 −83 −76 −83 −42
(8) (7) (4) (3) (11) (11) (7) (9) (11) (9)

All units are given in kcal/mol.

*ΔEele: electrostatic energy.

**ΔEvdW: van der Waals energy.

***ΔGEPB: the electrostatic contribution to solvation free energy.

$ΔGCavity: nonpolar contribution to the solvation free energy.

$$ΔGgas: gas-phase energy.

#ΔGsol: solvation energy.

ˆΔGbind: estimated binding free energy.

Standard deviations of corresponding values are given in parentheses.

DENV4 (NC) corresponds to New Caledonia strain; DENV (P) Corresponds to Philippines strain.