Table 8. Mean RF 10-fold CV prediction performance based on side chain polarities of the native and new amino acids at the mutated position.
New/native | Polar | Apolar | Charged | All | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
BAR | MCC | % | BAR | MCC | % | BAR | MCC | % | BAR | MCC | % | |
Polar | 0.92 | 0.84 | 13 | 0.89 | 0.75 | 11 | 0.92 | 0.85 | 6 | 0.91 | 0.81 | 30 |
Apolar | 0.88 | 0.78 | 13 | 0.88 | 0.75 | 8 | 0.93 | 0.85 | 6 | 0.89 | 0.79 | 27 |
Charged | 0.92 | 0.85 | 20 | 0.91 | 0.81 | 16 | 0.84 | 0.68 | 7 | 0.90 | 0.81 | 43 |
All | 0.91 | 0.83 | 46 | 0.90 | 0.78 | 35 | 0.89 | 0.79 | 19 | 0.90 | 0.81 | 100 |