Table 7.
Primer Sequences (5′-3′) 2 | Accession Number | Size (Base) 3 | Tm (°C) 4 | Tissue 5 | Linear Dynamic Range(ng RNA) 6 | E 7 | |
---|---|---|---|---|---|---|---|
SLC2A1 1 | F-AGATGATGCGGGAGAAGAAG | BC119940 | 238 | 89 | L | 6.25–100 | 1.86 (0.98) |
R-TCCACCACAAATAGCGACAC | M | 6.25–100 | 1.99 (0.95) | ||||
SLC2A4 | F-CCAACTGGACATGCAACTTCATC | BC114082 | 206 | 85 | M | 3.13–67.5 | 1.90 (0.99) |
R-CACTTCCTGCTCCAGAAGAGA | |||||||
FBP1 | F-CAACATCGACTGCCTTGTGT | BC102974 | 224 | 88 | L | 1.56–50 | 1.97 (0.99) |
R-CCCTGTCCACCAAAATGAAC | |||||||
PCK1 | F-AACTCGCTCCTTGGGAAGAA | BC112664 | 261 | 89 | L | 3.13–50 | 1.91 (0.99) |
R-CCGCAAGTTACCTTGTTGGT | |||||||
PCK2 | F-CATTGACGCCATCATCTTTG | BC102244 | 150 | 88 | L | 3.13–50 | 1.87 (0.99) |
R-TGCATGATGACCTTCCCTTT | |||||||
PC | F-CTATGTTGCCCACAGCTTCA | BC114135 | 244 | 90 | L | 3.13–50 | 1.93 (0.98) |
R-GATGTCCATGCCATTCTCCT | |||||||
CPT1A | F-CCTATTTTGGACACGGGAAA | XM_002699420.1 | 172 | 86.5 | L | 3.13–50 | 1.78 (0.99) |
R-TCAAACCACCTGTCGAAACA | |||||||
HMGS2 | F-GGCCTTTCACTCTCGATGAT | BC112666 | 170 | 85 | L | 1.56–50 | 1.93 (0.99) |
R-TTCCAGCTTTAGTCCCCTGA | |||||||
HMGL | F-CAGCTTCGTGTCTCCCAAAT | BC118276 | 227 | 87 | L | 3.13–50 | 1.87 (0.99) |
R-ACCGCTGCAAACTCTCATCT | |||||||
BDH2 | F-TATCCGGTGCAACTGTGTGT | BC102567 | 204 | 84 | L | 3.13–50 | 2.01 (0.98) |
R-ACAGGATTCCCCGTGATGTA | |||||||
ACCA | F-ATCCGACGCCTTACTTTCCT | AJ132890 | 193 | 82.5 | L | 3.13–50 | 2.05 (0.98) |
R-TTCTCATCCGGTTCAGCTCT | |||||||
FASN | F-AACACCTCGGTGCAGTTCAT | AY343889 | 196 | 88 | L | 3.13–50 | 1.94 (0.99) |
R-CTTTCTCTTTGCAGCCATCC | |||||||
GPAM | F-GCCAGATGGACGGAAAGATA | AY515690 | 182 | 83.5 | L | 3.13–50 | 2.00 (0.97) |
R-TCGTATTGGTGGACAGCGTA | |||||||
DGAT1 | F-CTCTGTGCCTGGTCATTGTG | BC118146 | 239 | 90 | L | 3.13–50 | 1.89 (0.99) |
R-CCGGTAGGAGAACAGCTTGA | |||||||
ACSL1 | F-GAACTACAGGCAACCCCAAA | BC119914 | 240 | 83 | L | 3.13–50 | 1.94 (0.99) |
R-GGGCCTTGAGATCATCCATA | |||||||
GUSB | F-ACCAGAAGCCGATGATTCAG | BC133415 | 160 | 84 | L | 3.13–75 | 1.96 (0.99) |
R-AGCTCGCCAACCACATATTC | M | 6.25–100 | 1.76 (0.96) |
SLC2A1: glucose transporter 1, FBP1: fructose-1,6-bisphosphatase 1, PCK1 and PCK2: phosphoenolpyruvate carboxykinase 1 and 2, PC: pyruvate carboxylase, CPT1A: carnitine palmitoyltransferase 1A, ACSL1: acyl-CoA synthetase long-chain family member 1, HMGS2: 3-hydroxy-3-methylglutaryl-CoA synthase 2, HMGL: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, BDH2: 3-hydroxybutyrate dehydrogenase, type 2, ACCA: acetyl-CoA carboxylase, FASN: fatty acid synthase, GPAM: mitochondrial glycerol phosphate acyltransferase, DGAT1: diacylglycerol O-acyltransferase homolog 1, GUSB: β-glucuronidase. 1 Primer concentration and annealing temperature for this gene was 1.0 µM and 58 °C; 2 F-forward, R-reverse, Exon-exon junctions are underlined; 3 Amplicon sizes of PCR products; 4 Melting temperatures of PCR products; 5 Tissues which were measured for the gene. L: liver, M: muscle; 6 The range of RNA input (ng) in which linearity of standard curve was confirmed; 7 Amplification efficiency (E) and r2 in parenthesis determined by dilution method.