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. 2018 May 8;10(5):188. doi: 10.3390/toxins10050188

Table 7.

Characteristics of the primers and the real-time qPCR conditions.

Primer Sequences (5′-3′) 2 Accession Number Size (Base) 3 Tm (°C) 4 Tissue 5 Linear Dynamic Range(ng RNA) 6 E 7
SLC2A1 1 F-AGATGATGCGGGAGAAGAAG BC119940 238 89 L 6.25–100 1.86 (0.98)
R-TCCACCACAAATAGCGACAC M 6.25–100 1.99 (0.95)
SLC2A4 F-CCAACTGGACATGCAACTTCATC BC114082 206 85 M 3.13–67.5 1.90 (0.99)
R-CACTTCCTGCTCCAGAAGAGA
FBP1 F-CAACATCGACTGCCTTGTGT BC102974 224 88 L 1.56–50 1.97 (0.99)
R-CCCTGTCCACCAAAATGAAC
PCK1 F-AACTCGCTCCTTGGGAAGAA BC112664 261 89 L 3.13–50 1.91 (0.99)
R-CCGCAAGTTACCTTGTTGGT
PCK2 F-CATTGACGCCATCATCTTTG BC102244 150 88 L 3.13–50 1.87 (0.99)
R-TGCATGATGACCTTCCCTTT
PC F-CTATGTTGCCCACAGCTTCA BC114135 244 90 L 3.13–50 1.93 (0.98)
R-GATGTCCATGCCATTCTCCT
CPT1A F-CCTATTTTGGACACGGGAAA XM_002699420.1 172 86.5 L 3.13–50 1.78 (0.99)
R-TCAAACCACCTGTCGAAACA
HMGS2 F-GGCCTTTCACTCTCGATGAT BC112666 170 85 L 1.56–50 1.93 (0.99)
R-TTCCAGCTTTAGTCCCCTGA
HMGL F-CAGCTTCGTGTCTCCCAAAT BC118276 227 87 L 3.13–50 1.87 (0.99)
R-ACCGCTGCAAACTCTCATCT
BDH2 F-TATCCGGTGCAACTGTGTGT BC102567 204 84 L 3.13–50 2.01 (0.98)
R-ACAGGATTCCCCGTGATGTA
ACCA F-ATCCGACGCCTTACTTTCCT AJ132890 193 82.5 L 3.13–50 2.05 (0.98)
R-TTCTCATCCGGTTCAGCTCT
FASN F-AACACCTCGGTGCAGTTCAT AY343889 196 88 L 3.13–50 1.94 (0.99)
R-CTTTCTCTTTGCAGCCATCC
GPAM F-GCCAGATGGACGGAAAGATA AY515690 182 83.5 L 3.13–50 2.00 (0.97)
R-TCGTATTGGTGGACAGCGTA
DGAT1 F-CTCTGTGCCTGGTCATTGTG BC118146 239 90 L 3.13–50 1.89 (0.99)
R-CCGGTAGGAGAACAGCTTGA
ACSL1 F-GAACTACAGGCAACCCCAAA BC119914 240 83 L 3.13–50 1.94 (0.99)
R-GGGCCTTGAGATCATCCATA
GUSB F-ACCAGAAGCCGATGATTCAG BC133415 160 84 L 3.13–75 1.96 (0.99)
R-AGCTCGCCAACCACATATTC M 6.25–100 1.76 (0.96)

SLC2A1: glucose transporter 1, FBP1: fructose-1,6-bisphosphatase 1, PCK1 and PCK2: phosphoenolpyruvate carboxykinase 1 and 2, PC: pyruvate carboxylase, CPT1A: carnitine palmitoyltransferase 1A, ACSL1: acyl-CoA synthetase long-chain family member 1, HMGS2: 3-hydroxy-3-methylglutaryl-CoA synthase 2, HMGL: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, BDH2: 3-hydroxybutyrate dehydrogenase, type 2, ACCA: acetyl-CoA carboxylase, FASN: fatty acid synthase, GPAM: mitochondrial glycerol phosphate acyltransferase, DGAT1: diacylglycerol O-acyltransferase homolog 1, GUSB: β-glucuronidase. 1 Primer concentration and annealing temperature for this gene was 1.0 µM and 58 °C; 2 F-forward, R-reverse, Exon-exon junctions are underlined; 3 Amplicon sizes of PCR products; 4 Melting temperatures of PCR products; 5 Tissues which were measured for the gene. L: liver, M: muscle; 6 The range of RNA input (ng) in which linearity of standard curve was confirmed; 7 Amplification efficiency (E) and r2 in parenthesis determined by dilution method.