Table 3. Allelic and genotypic tests of rs2511989 from primary screen of UK sample (n=953), US sample (n=500), and the two cohorts combined.
| UK cohort |
US cohort |
Combined |
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | OR (95% CI) | Uncorrected p value |
Corrected p value* |
Case | Control | OR (95% CI) | p value | Case | Control | OR (95% CI) | p value | ||
| Allelic | 5.4×10–6 | 0·0005 | 0·0037 | 7.49×10–8 | ||||||||||
| G | 597 (63%) | 500 (52%) | .. | .. | .. | 322 (65%) | 282 (56%) | .. | .. | 919 (64%) | 782 (54%) | .. | .. | |
| A | 355 (37%) | 454 (48%) | 0·65 (0·55–0·79)† |
.. | .. | 174 (35%) | 222 (44%) | 0·69 (0·53–0·89)† |
.. | 529 (37%) | 676 (46%) | 0·67 (0·57–0·77)† |
.. | |
| Genotypic | 4.0×10–5 | 0·0037 | 0·0080 | 6.08×10–7 | ||||||||||
| GG | 191 (40%) | 132 (28%) | .. | .. | .. | 100 (40%) | 79 (31%) | .. | .. | 291 (40%) | 211 (29%) | .. | ||
| GA | 215 (45%) | 236 (50%) | 0·63 (0·47–0·84)‡ |
.. | .. | 122 (49%) | 124 (49%) | 0·77 (0·53–1.14)‡ |
.. | 337 (47%) | 360 (49%) | 0·68 (0·54–0·86)‡ |
.. | |
| AA | 70 (15%) | 109 (23%) | 0·44 (0·31–0·64)‡ |
.. | .. | 26 (11%) | 49 (19%) | 0·42 (0·24–0·73)‡ |
.. | 96 (13%) | 158 (22%) | 0·44 (0·32–0·60)‡ |
.. | |
Corrected for 93 single nucleotide polymorphisms.
Relative to G allele.
Relative to wildtype (GG) homozyte.