Table 2. Enrichment statistics for the top eight most enriched KEGG pathways.
Pathway | KEGG map number | p value | Percent of genes in core set | Percent of genes in reference set |
---|---|---|---|---|
Cysteine and methionine metabolism | map00270 | 0.000131 | 3.01% | 0.84% |
Starch and sucrose metabolism | map00500 | 0.002257 | 5.51% | 2.65% |
Linoleic acid metabolism | map00591 | 0.003267 | 1% | 0.12% |
alpha-Linolenic acid metabolism | map00592 | 0.013337 | 1.13% | 0.23% |
Novobiocin biosynthesis | map00401 | 0.050813 | 1.25% | 0.36% |
Alanine, aspartate and glutamate metabolism | map00250 | 0.099254 | 1.13% | 0.35% |
Carotenoid biosynthesis | map00906 | 0.099254 | 0.63% | 0.11% |
Tropane, piperidine and pyridine alkaloid biosynthesis | map00960 | 0.099254 | 1.25% | 0.43% |
The core set has disproportionately more genes involved in the indicated pathways than the reference set. P values were calculated using the Fisher Exact Test and are FDR corrected for multiple tests.