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. 2018 May 16;19(5):1485. doi: 10.3390/ijms19051485

Table 1.

Gene expression changes in csPIMT−/− relative to PIMTfl/fl mouse heart.

Function Gene KO/WT KO/WT KO/WT KO/WT
2 M, qPCR 2 M RNA-Seq 6 M, qPCR 6 M, RNA-Seq
OXPHOS
Ndufaf4 0.35 * 0.21 0.18 ** 0.20
Ndufaf5 0.29 * 0.33 0.21 ** 0.17
Ndufs4 0.51 * 0.42 0.27 ** 0.24
Cox7b 0.32 * 0.27 0.36 * 0.41
Cox10 0.59 0.27 0.25 ** 0.28
Sdha 0.63 0.52 0.41 * 0.37
Sucla2 0.24 * 0.12 0.12 ** 0.08
Energy metabolism/fatty acid
Pparα 0.54 0.66 0.49 0.57
Ppargc1a 0.51 0.36 0.55 0.45
Acadm 0.36 * 0.39 0.12 ** 0.27
Ucp3 0.63 0.61 0.15 ** 0.24
Abcc9 0.61 0.67 0.16 * 0.49
Glucose metabolism
Gck(GK) 3.93 * 1.97 2.46 * 3.87
Pck1 1.88 4.23 0.51 0.63
Pdk4 0.38 * 0.37 0.24 * 0.99
HK2 0.74 0.97 0.45 * 0.83
Glut4 0.59 0.92 0.36 * 0.78
Transcription factor, coactivator
Med1 0.64 0.51 0.66 0.48
NcoA6 0.69 0.66 0.57 0.62
Tfam 0.47 0.25 0.19 ** 0.48
Mitophagy/mitochondria fission
Pink1 2.16 * 1.93 1.57 1.65
Drp1 0.58 0.41 0.39 * 0.46
Cardiomyopathy/Fibrosis
Tgfb2 0.66 0.91 9.41 ** 5.23
Ctgf 1.16 2.83 6.42 ** 7.71
Col9a2 3.24 * 6.42 8.33 ** 26.06
Fgf6 1.86 2.37 10.92 ** 17.65
Fgf21 2.35 * 3.08 5.18 ** 6.22
Mmp3 3.92 * 2.37 10.86 ** 7.61
Timp1 4.58 ** 4.97 4.63 ** 6.18
Hypertrophy/dilation
Atf3 1.19 1.57 3.91 * 3.02
Ace 2.69 * 2.23 3.78 * 6.48
Wisp2 4.72 ** 3.62 11.61 ** 8.74
Thbs4 5.91 ** 6.68 9.34 ** 8.56
Calcium homeostasis and signaling pathway
Atp2b1 0.34 * 0.22 0.31 * 0.25
Atp2a1 0.53 0.52 0.23 * 0.43
Ryr2 0.65 0.53 0.14 ** 0.54
Map3k6 2.14 3.07 3.01 * 8.01
Cacnb1 2.49 * 1.98 3.72 * 5.12
Pde1c 0.38 0.21 0.21 ** 0.14
Cacna1h 0.29 * 0.23 0.19 ** 0.01
Mapk8 0.27 * 0.21 0.33 * 0.18

* p < 0.05, ** p < 0.01. KO, csPIMT−/−; WT, PIMT fl/fl; M, months.