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. 2018 May 21;14(5):e1007371. doi: 10.1371/journal.pgen.1007371

Table 5. 111 variants: Fraction of top variants in exome chip study retrieved with imputation of HapMap study.

r^pred,adj2 MAF
5 − 50% 1 − 5% 0 − 1%
0.7-1 65% (49/75) 50% (4/8) -
0.3-0.7 67% (2/3) 0% (0/17) 0% (0/3)
0-0.3 - - 0% (0/5)

This table presents summary statistics imputation results, limited to 111 variants identified as “novel” by [13]. We summarised the results according to their allele frequency and imputation quality category. For each subgroup we calculated the fraction of top exome variants that had a P-value ≤ 0.05/111 with summary statistics imputation.