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. 2018 May;6(9):162. doi: 10.21037/atm.2018.05.07

Table 4. Optimization of read length vs. indel call accuracy by in silico trimming.

Gene_bp_indel Read length
300_bp 250_bp 225_bp 200_bp
FLT3_30_ins 0.16 0.17 0.17 0.15
FLT3_30_ins 0.13 0.15 0.15 0.12
FLT3_36_ins 0.36 0.37 0.37 0.30
FLT3_54_ins 0.63 0.68 0.64 0.59
FLT3_78_ins 0.01 0.01 0.02 0.01
FLT3_93_ins 0.02 0.02 0.02 Not detected
FLT3_93_ins 0.05 0.07 0.10 Not detected
KIT_6_delins 0.31 0.40 0.40 0.40
NPM_4_ins 0.45 0.45 0.45 0.45
NPM_4_ins 0.46 0.46 0.46 0.46
NPM_4_ins 0.44 0.45 0.45 0.45
NPM_4_ins 0.4 0.40 0.40 0.40
NRAS_30_ins 0.43 0.34 0.34 0.34