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. 2018 Jun 4;19:72. doi: 10.1186/s13059-018-1444-y

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Geographically restricted selective sweep in northern-most populations. Left panels: A magnified view of different summary statistics that are sensitive to the effects of a selective sweep for the ~ 700 kbp region surrounding PtFT2. The gray bar marks the location of the PtFT2 gene. Right panels: Comparison of these statistics between the PtFT2 region (colored boxplot) and the genome-wide averages (gray boxplot). Statistics were calculated separately for individuals from southern (population 1–6), middle (populations 7–8), and northern (populations 9–12) in Sweden. a, b Nucleotide diversity, π. c, d Genetic differentiation, F_ST. e, f H12. g, h H2/H1. i, j Composite likelihood ratio (CLR) test for the presence of a selective sweep