Table V.
Correlation between experiments
| Experiment | Ata Seed/Root 2 | At Seed/Leaf 2 | Bnb Seed/Leaf |
|---|---|---|---|
| At Seed/Root 1 | |||
| Ratio | 0.87 | ||
| Int (seed)c | 0.96 | 0.96 | 0.83 |
| Int (root) | 0.84 | ||
| Int (seed/root) | 0.17 | ||
| At Seed/Leaf 1 | |||
| Ratio | 0.86 | 0.83 | |
| Int (seed) | 0.89 | 0.92 | 0.83 |
| Int (leaf) | 0.91 | 0.77 | |
| Int (seed/leaf)d | 0.12 | 0.16 | |
| Bn Seed/Leaf | |||
| Ratio | 0.73 | ||
| Int (seed) | 0.79 | 0.80 | |
| Int (leaf) | 0.76 | ||
| Int (seed/leaf) | 0.20 |
Pearson correlation coefficients between experiments are given for ratios and intensities (Int) of all data points on the microarrays.
a
At, Experiments with probes from Arabidopsis.
b
Bn, Experiments with probes from oilseed rape. The tissues used for probe synthesis are given after the organisms. Repeated experiments contained the Cy3/Cy5 fluorescence dyes in opposite orientation.
c
The information in parentheses defines the tissues used for calculating the correlation coefficients between intensities.
d
Correlation values between seed and leaf intensities are given for comparison.