Table 1.
Bacterial strains used in this study and their reaction by LAMP assays
| Bacterial species | Strains | Disease/Hosta | Sourceb | LAMPc | |
|---|---|---|---|---|---|
|
| |||||
| DS | Bühlmann | ||||
| Erwinia amylovora | YKB 12316 | FB/pear | RDA | + | + |
| YKB 12317 | FB/pear | RDA | + | + | |
| YKB 12318 | FB/apple | RDA | + | + | |
| YKB 12319 | FB/apple | RDA | + | + | |
| YKB 12320 | FB/pear | RDA | + | + | |
| YKB 12321 | FB/pear | RDA | + | + | |
| YKB 12322 | FB/apple | RDA | + | + | |
| YKB 12323 | FB/apple | RDA | + | + | |
| Erwinia pyrifoliae | KACC 13945 | BSB/nk | KACC | − | − |
| KACC 13947 | BSB/nk | KACC | − | +(1/3) | |
| KACC 13948 | BSB/nk | KACC | − | − | |
| KACC 13949 | BSB/nk | KACC | − | − | |
| KACC 13952 | BSB/nk | KACC | − | +(3/3) | |
| YKB 12324 | BSB/apple | RDA | − | − | |
| YKB 12325 | BSB/apple | RDA | − | +(2/3) | |
| YKB 12326 | BSB/apple | RDA | − | − | |
| YKB 12327 | BSB/apple | RDA | − | − | |
| YKB 12328 | BSB/apple | RDA | − | − | |
| Pseudomonas syringae pv. syringae | SHPS 005 | SB/apple | ANU | − | − |
| SHPS 007 | SB/apple | ANU | − | − | |
| SHPS 022 | SB/apple | ANU | − | +(1/3) | |
| SHPS 0056 | SB/apple | ANU | − | − | |
| WSPS 039 | SB/apple | ANU | − | +(1/3) | |
| WSPS 042 | SB/apple | ANU | − | − | |
| WSPS 048 | SB/apple | ANU | − | − | |
| WSPS 050 | SB/apple | ANU | − | − | |
a
FB, Fire blight; BSB, Black shoot blight; SB, Shoot blight; nk, not known.
b
KACC, Korean Agricultural Culture Collection; RDA, Rural Development Administration; ANU, Andong National University.
c
DS-LAMP, this study; Bühlmann-LAMP (Bühlmann et al., 2013): +, positive reaction with 3 replications; −, negative reaction with 3 replications.