TABLE 1.
Comparisons of different methods for cancer classification on the R-GCM and MBD datasets*
| Datasets | Method | REC | FPR | MCC | Overall Acc (Q) | General Corr (GC) |
|---|---|---|---|---|---|---|
| R-GCM | K-means | 0.647 (1.72×10−5) | 0.031 (1.69×10−6) | 0.639 (3.04×10−6) | 0.691 (2.38×10−6) | 0.713 (2.20×10−6) |
| K-means with PCA | 0.471 (4.11×10−6) | 0.056 (1.11×10−6) | 0.458 (1.39×10−6) | 0.532 (2.42×10−7) | 0.633 (1.40×10−5) | |
| K-means with LRR | 0.706 (3.76×10−1) | 0.026 (6.49×10−4) | 0.678 (3.63×10−2) | 0.734 (6.23×10−3) | 0.749 (3.13×10−3) | |
| SSC-LRR | 0.715 | 0.023 | 0.762 | 0.753 | 0.762 | |
| MBD | K-means | 0.846 (8.42×10−3) | 0.112 (2.32×10−3) | 0.717 (3.74×10−4) | 0.644 (2.58×10−3) | 0.833 (7.16×10−3) |
| K-means with PCA | 0.675 (1.14×10−7) | 0.171 (6.94×10−6) | 0.532 (3.68×10−7) | 0.459 (7.24×10−9) | 0.698 (3.22×10−6) | |
| K-means with LRR | 0.762 (6.62×10−4) | 0.079 (1.32×10−4) | 0.770 (5.05×10−5) | 0.765 (8.93×10−5) | 0.836 (4.69×10−5) | |
| SSC-LRR | 0.959 | 0.033 | 0.888 | 0.897 | 0.920 |