Table 1.
Annotation of the top ten HVPC clusters.
| SEED | SEED | |||||||
|---|---|---|---|---|---|---|---|---|
| Cluster | Size∗ | nr | Pfam | FIGfams | pVOG | GO | subsystem | category |
| 1 | 72340 | MULTISPECIES: class A broad-spectrum beta-lactamase TEM-116 [Bacteria] | Beta-lactamase | Beta-lactamase (EC 3.5.2.6) | – | – | Virulence, Resistance to antibiotics and toxic compounds | – |
| 2 | 27442 | ORF1 [Torque teno virus] | TT viral orf 1 | – | – | – | – | – |
| 3 | 21304 | ORF1 [Torque teno virus] | TT viral orf 1 | – | – | – | – | – |
| 4 | 12799 | orf00052, partial [uncultured crAssphage] | – | – | – | – | – | – |
| 5 | 12425 | putative helicase [Lactococcus phage 1706] | – | – | Bbp29; D5-like protein; DNA primase; DNA primase/helicase; DNA primase/polymerase; P4 family phage/plasmid primase; gp108; gp109; gp11; gp34; gp49; gp60; gp68; gp69; gp70; gp71; gp72; gp74; gp81; gp86; gp88; gp89; gp90; gp92; gp94; gp9a; helicase; hypothetical protein; orf40; phage associated primase; phage associated primase/P4 family phage/plasmid primase; phage-associated primase/P4 family phage/plasmid primase; primase; primase/polymerase; putative DNA primase; putative DNA-polymerase or DNA-primase; putative P4 family primase; putative predicted product; putative primase; putative primase/helicase protein | – | – | – |
| 6 | 11731 | – | – | – | – | – | – | – |
| 7 | 9611 | ORF1 [Torque teno virus] | TT viral orf 1 | – | – | – | – | – |
| 8 | 8814 | – | – | – | – | – | – | – |
| 9 | 7169 | beta-galactosidase alpha-peptide [unidentified cloning vector] | – | – | – | – | – | – |
| 10 | 6489 | phage tail protein [[Clostridium] symbiosum] | – | – | DNA-binding domain protein; HTH DNA binding domain protein; gp106; hypothetical protein; structural protein | – | – | – |
nr, NCBI’s non-redundant protein database; pVOG, prokaryotic virus orthologous groups; GO, gene ontology; TT, Torque Teno Virus. ∗Cluster size refers to the number of ORFs in each cluster.