Table 2.
JGID | BLASTx | Fold Change⊥ | FDR p |
---|---|---|---|
Antioxidant
| |||
103340 | Catalase (XP_001633745.1) | −3.57 ↑ | 2.10E-03 |
236349 | Superoxide dismutase (XP_001641079.1) | −7.68 ↑ | 3.95E-09 |
89807 | Thioredoxin (XP_001638442.1) | −12.72 ↑ | 5.42E-13 |
81388 | Glutathione peroxidase (XP_001641220.1) | −9.75 ↑ | 1.21E-12 |
195315 | HSP70 (XP_001622423.1)* | −3.81 ↑ | 1.32E-03 |
178640 | HSP90 (X P_001640689.1) | −6.16 ↑ | 1.59E-06 |
Cell Cycle and Regulation
| |||
110405 | PDZ binding protein (XP_001631518.1)* | 2.24 ↓ | 0.05 |
208897 | Dynein light chain Tctex-type 1 (XP_001619966.1)* | −3.08 ↑ | 3.55E-04 |
185341 | E3 ubiquitin-protein ligase MYLIP (XP_001633631.1)* | −2.55 ↑ | 6.75E-03 |
234384 | Adenylate cyclase (XP_001637931.1)* | −3.24 ↑ | 3.27E-03 |
110258 | Thrombospondin-1 (XP_001631080)* | 4.79 ↓ | 1.58E-06 |
98238 | Homeobox protein (XP_001635465.1)* | −2.63 ↑ | 2.81E-03 |
86719 | Astacin-like (XP_001639324.1)* | 2.02 ↓ | 0.04 |
114959 | Wnt signaling protein (XP_001630030.1)* | 2.04 ↓ | 0.04 |
2028 | Low-density lipoprotein receptor (XP_001623138.1)* | 2.53 ↓ | 0.03 |
Immunity
| |||
204961 | RIPL1-like protein (XP_001634829.1)* | −2.5 ↑ | 0.04 |
170435 | LBP (XP_001629157.1) | −3.43 ↑ | 6.33E-04 |
82163 | MyD88 (XP_001641005.1) | −8.64 ↑ | 2.77E-09 |
1816 | TIR (XP_001637587.1) | −6.78 ↑ | 5.44E-07 |
18 | Complement (C3) precursor (BAH22723.1) | −3.72 ↑ | 7.22E-05 |
196263 | MAC/PF (XP_001642092.1) | −2.84 ↑ | 3.57E-03 |
112390 | TRAF6 (XP_001630936.1) | 2.42 ↓ | 0.01 |
Metabolism
| |||
248519 | Malate dehydrogenase (XP_001622276.1) | −23.45 ↑ | 3.46E-14 |
186479 | Carbonic anhydrase (XP_001632619.1) | −3.48 ↑ | 2.37E-03 |
244812 | Fructose-bisphosphate aldolase (XP_001629735.1) | −2.93 ↑ | 6.27E-03 |
237552 | Ferritin H (XP_001624357.1) | −3.77 ↑ | 0.02 |
173595 | Glutamate transporter (XP_001625720.1) | −3.44 ↑ | 7.53E-04 |
Signal Transduction
| |||
50930 | Melanopsin (XP_001631416.1)* | 2.7 ↓ | 8.63E-03 |
101020 | HIOMT/melatonin (XP_001634470.1) | −5.49 ↑ | 5.18E-07 |
105524 | RAS GTPase (XP_001633090.1)* | −2.33 ↑ | 6.93E-03 |
40487 | Voltage-gated potassium channel (XP_001640129.1)* | 2.69 ↓ | 0.01 |
205216 | Rhodopsin-like receptor (XP_001634610.1)* | 2.24 ↓ | 0.03 |
118227 | Latrophilin receptor (XP_001620953.1) | −2.78 ↑ | 0.02 |
246569 | Voltage-gated calcium channel (XP_001626501.1)* | −2.13 ↑ | 3.66E-03 |
88314 | HIF1 (XP_001638872.1) | −16 ↑ | 5.83E-13 |
88486 | CK1δ/ε (XP_001638852.1)* | −2.25 ↑ | 0.01 |
248021 | bZIP CREB (XP_001623517.1) | −7.83 ↑ | 3.20E-08 |
242269 | bZIP DNA Binding Site (XP_001634376.1) | −20.78 ↑ | 1.71E-15 |
150375 | bZIP HLF (XP_001619763.1)* | −4.71 ↑ | 5.31E-05 |
Other
| |||
120351 | Frataxin (XP_001628857.1)* | −2.19 ↑ | 2.27E-03 |
238195 | TIMP (XP_001641336.1)* | −3.34 ↑ | 3.58E-03 |
Indicates maintenance of DE in the absence of a light cue.
The presented fold-change value represents mean expression at ZT18 minus ZT6 for each gene. Thus, a negative fold-change indicates higher expression during the daytime period of the 24-hour cycle, denoted by ↑.