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. 2018 Jun 1;22(6):879–892.e6. doi: 10.1016/j.stem.2018.05.003
Reagent or Resource Source Identifier
Antibodies

α-mouse Gr-1-Biotin eBioscience clone RB6-8C5; RRID:AB_469757
α-mouse CD5-Biotin eBioscience clone 53-7.3; RRID:AB_466338
α-mouse CD2-Biotin eBioscience clone RPA-2.10; RRID:AB_466314
α-mouse CD3ε-Biotin eBioscience clone 145-2C11; RRID:AB_466320
α-mouse Ter119-Biotin eBioscience clone TER-119; RRID:AB_466796
α-mouse CD8a-Biotin eBioscience clone 53-6.7; RRID:AB_466345
α-mouse B220-Biotin eBioscience clone RA3-6B2; RRID:AB_466450
PerCP Streptavidin BD Biosciences Cat#554064; RRID:AB_2336918
α-mouse Sca1-PE eBioscience clone D7; RRID:AB_466085
α-mouse cKIT-APC-eFluor780 eBioscience clone 2B8; RRID:AB_1272177
α-mouse CD150-APC BioLegend clone TC15-12F12.2; RRID:AB_493460
α-mouse CD48-PE-Cy7 BD Biosciences clone HM48-1; RRID:AB_1727501
α-human CD34-APC eBiosciences clone 4H11; RRID:AB_2016604
α-mouse CD34-FITC eBioscience clone RAM34; RRID:AB_465020
α-human CD16/32-PE eBioscience clone 93; RRID:AB_465568
α-human CD38- PE-Cy7 BD Biosciences clone HB7; RRID:AB_399969
α-mouse Gr-1-PE eBioscience clone RB6-8C5; RRID:AB_466046
α-mouse CD3ε-APC-eFluor 780 eBioscience clone 145-2C11; RRID:AB_11149132
α-mouse B220-APC eBioscience clone RA3-6B2; RRID:AB_469394
α-mouse Mac1-PerCP-Cy5.5 eBioscience clone M1/70; RRID:AB_953560
α-mouse CD45.1-FITC eBioscience clone A20; RRID:AB_465059
α-mouse CD45.2-AlexaFluor 700 eBioscience clone 104; RRID:AB_657752
rabbit α-cleaved caspase 3 Cell Signaling Technology clone 5A1E; RRID:AB_2070042
mouse α- α-MEK1 Cell Signaling Technology clone 61B12; RRID:AB_10693788
rabbit α-pMEK1/2 S218/222 Cell Signaling Technology Cat #9121; RRID:AB_331648
rabbit α-MEK1/2 Cell Signaling Technology Cat #9122; RRID:AB_823567
rabbit α-pMEK1 T292 Upstate Cat #07-852; RRID:AB_568845
rabbit α-MEK2 Cell Signaling Technology clone 13E3; RRID:AB_2140641
rabbit α-ERK1/2 Cell Signaling Technology Cat #9102; RRID:AB_330744
rabbit α-pERK1/2 Cell Signaling Technology Cat #9101; RRID:AB_331646
rabbit α-AKT Cell Signaling Technology Cat #9272; RRID:AB_329827
rabbit α-pAKT S473 Cell Signaling Technology Cat #9271; RRID:AB_329825
rabbit α-FOXO3a Cell Signaling Technology Cat #2497; RRID:AB_836876
rabbit α-pFOXO3a S294 Cell Signaling Technology Cat #5538; RRID:AB_10696878
rabbit α-pFOXO3a S253 Cell Signaling Technology Cat #9466; RRID:AB_2106674
rabbit α-mTOR Cell Signaling Technology Cat #2983; RRID:AB_2105622
rabbit α-p-mTOR S2448 Cell Signaling Technology Cat #5536; RRID:AB_10691552
rabbit α-S6 Cell Signaling Technology Cat #2217; RRID:AB_331355
rabbit α-pS6 Cell Signaling Technology Cat #4858; RRID:AB_916156
rabbit α-PINK1 Abcam Cat #ab23707; RRID:AB_447627
rabbit mAb IgG isotype control Cell Signaling Technology Cat #3900; RRID:AB_1550038
mouse mAb IgG isotype control Cell Signaling Technology Cat #5415; RRID:AB_10829607
goat α-rabbit IgG Alexa Fluor 488 ThermoFisher Scientific Cat #R37116; RRID:AB_2556544
goat α-mouse IgG Alexa Fluor 488 ThermoFisher Scientific Cat #A28175; RRID:AB_2536161
goat α-rabbit IgG Alexa Fluor 647 ThermoFisher Scientific Cat #A27040; RRID:AB_2536101
goat α-mouse IgG Alexa Fluor 647 ThermoFisher Scientific Cat #A28181; RRID:AB_2536165
mouse α-TOMM20 Abcam Cat #ab56783; RRID:AB_945896
rabbit α-LAMP1 Abcam Cat #ab24170; RRID:AB_775978
mouse α-p-Histone H2A.X (S139) Millipore clone JBW301; RRID:AB_309864

Chemicals, Peptides, and Recombinant Proteins

5-Fluorouracil Sigma Cat #F6627
N-acetyl-L-cysteine Sigma Cat #A7250
5-bromodeoxyuridine Sigma Cat #B5002
DMSO Sigma Cat #276855
U0126 Cell Signaling Technology Cat #9903S
LY294002 Cell Signaling Technology Cat #9901S
Metformin Sigma Cat #PHR1084
Rapamycin Enzo Life Science Cat #BML-A275-0005/0025
Polyethylene glycol (PEG) 400 Sigma Cat #91893
TweenR 80 Sigma Cat #P1754
CellROX Green Reagent ThermoFisher Scientific Cat #C10444
CellROX Deep Red Reagent ThermoFisher Scientific Cat #C10422
MitoTracker Green FM ThermoFisher Scientific Cat #M7514
MitoTracker Deep Red FM ThermoFisher Scientific Cat #M22426
TMRE Sigma Cat #87917
recombinant murine SCF PeproTech Cat #250-03
recombinant murine TPO PeproTech Cat #315-14
qRT-PCR primers Sigma Table S2

Critical Commercial Assays

FITC BrdU Flow Kit BD Biosciences Cat #559619
MethoCult M3434 StemCell Technologies Cat #03434
MethoCult H4435 Enriched StemCell Technologies Cat #04435
Mouse LTC assay StemCell Technologies https://cdn.stemcell.com/media/files/manual/MA28417-Mouse_Long_Term_Culture_Initiating_Cell_Assays_Procedure.pdf
Human LTC assay StemCell Technologies https://cdn.stemcell.com/media/files/manual/MA28412-Human_Long_Term_Culture_Initiating_Cell_Assay.pdf
Fixable Viability Dye eFluor 450 eBioscience Cat #65-0863-14
Fixation/Permeabilization Solution Kit BD Biosciences Cat #554714
FITC Mouse α-Ki-67 Set BD Biosciences Cat #556026
α-Biotin MicroBeads Miltenyi Biotec Cat #130-090-485

Deposited Data

RNA-seq data this paper GEO: GSE112842
Analysis of the F/F and MEK1 cKO hematopoietic compartments in different stress models this paper; Mendeley data https://doi.org/10.17632/7rdg6mjk5h.1
Validation of the antibodies used in the phosflow experiments this paper; Mendeley data https://doi.org/10.17632/7rdg6mjk5h.1

Experimental Models: Cell Lines

Human: CD34+ bone marrow progenitors CellSystems http://cellsystems.de/category/cd34-cells-1

Experimental Models: Organisms/Strains

Mouse: MAP2k1 (MEK1) F/F Catalanotti et al., 2009 N/A
Mouse: VAV1-iCRE de Boer et al., 2003 N/A
Mouse: C57/BL6 Ly5.1 Charles River Laboratories N/A