Table 4.
Information on genes included in the qVW-Bp2-1 region flanked by the markers Cgr6409 and ZHX37 and the qVW-Bp2-2 region flanked by the markers ZHX57 and ZHX70 in G. barbadense L.cv.Xinhai 21.
| Gene ID | Description | Length of ORF (bp) | Position | p-value | |
|---|---|---|---|---|---|
| qVW-Bp2-1(Cgr6409-ZHX37) | |||||
| ORF1 | GOBAR_DD30341 | Proteasome subunit beta type-5 | 453 | 48459376-48461650 | 2.54E-47 |
| ORF2 | GOBAR_DD30342 | Ribosome biogenesis gtpase | 1,902 | 48462958-48467223 | 9.75E-171 |
| ORF3 | GOBAR_DD30343 | 60 s ribosomal protein l17-2 | 624 | 48468112-48470678 | 2.21E-102 |
| ORF4 | GOBAR_DD22682 | Ankyrin repeat-containing protein at3g12360-like | 2,424 | 48497380-48502027 | 0 |
| ORF5 | GOBAR_DD35297 | Ankyrin repeat-containing protein at3g12360-like | 861 | 48509548-48510660 | 3.62E-159 |
| ORF6 | GOBAR_DD22684 | Ankyrin repeat-containing protein at3g12360-like | 1,992 | 48512105-48516264 | 1.52E-138 |
| ORF7 | GOBAR_DD22685 | Ankyrin repeat-containing protein at3g12360-like | 687 | 48518172-48518977 | 3.17E-113 |
| ORF8 | GOBAR_DD35300 | Ankyrin repeat-containing protein at3g12360-like | 1,734 | 48524929-48526999 | 0 |
| ORF9 | GOBAR_DD22688 | Ankyrin repeat-containing protein at3g12360-like | 525 | 48539188-48539810 | 5.22E-72 |
| ORF10 | GOBAR_DD22689 | Ankyrin repeat-containing protein at3g12360-like | 627 | 48547338-48548409 | 4.37E-94 |
| ORF11 | GOBAR_DD22693 | Ciliary neurotrophic factor | 609 | 48569966-48570982 | 2.72E-104 |
| ORF12 | GOBAR_DD22694 | Squamosa promoter-binding-like protein 2 | 1,413 | 48574845-48576853 | 0 |
| ORF13 | GOBAR_DD22695 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 | 2,322 | 48577846-48580167 | 0 |
| ORF14 | GOBAR_DD22697 | Ran bp2 nzf zinc finger-like superfamily protein isoform partial | 1,491 | 48584306-48590000 | 1.23E-173 |
| ORF15 | GOBAR_DD22700 | Glucuronoxylan 4-o-methyltransferase 1-like | 870 | 48604891-48605760 | 0 |
| ORF16 | GOBAR_DD22702 | alpha-ketoglutarate-dependent dioxygenase alkb | 1,158 | 48611845-48615440 | 0 |
| ORF17 | GOBAR_DD22703 | Chaperone protein dnaj-related | 297 | 48619239-48619535 | 4.90E-62 |
| ORF18 | GOBAR_DD22704 | REF SRPP-like protein at1g67360 | 519 | 48623946-48626719 | 4.30E-117 |
| ORF19 | GOBAR_DD22705 | Cytochrome p450 78a5-like | 1,575 | 48635838-48639097 | 0 |
| ORF20 | GOBAR_DD22706 | Flavonoid 3-methyltransferase-like isoform x1 | 726 | 48651110-48654144 | 1.95E-173 |
| ORF21 | GOBAR_DD22701 | Duf493 family protein | 597 | 48676130-48677850 | 5.88E-95 |
| ORF22 | GOBAR_DD22699 | Non-specific lipid transfer protein gpi-anchored 1-like | 582 | 48691074-48692628 | 2.57E-79 |
| ORF23 | GOBAR_DD22696 | —NA— | 201 | 48701954-48702154 | |
| ORF24 | GOBAR_DD35898 | Retinol dehydrogenase 11 | 768 | 48730250-48733666 | 4.12E-74 |
| ORF25 | GOBAR_DD35897 | b-zip transcription isoform 2 | 1,032 | 48736261-48741560 | 0.80 |
| ORF26 | GOBAR_DD35896 | Hypothetical protein B456_012G180400 | 303 | 48743381-48743683 | 3.47E-17 |
| ORF27 | GOBAR_DD35895 | Hypothetical protein B456_012G180400 | 345 | 48749870-48750214 | 6.37E-31 |
| ORF28 | GOBAR_DD35894 | Hypothetical protein B456_012G180400 | 372 | 48752969-48753340 | 1.37E-52 |
| ORF29 | GOBAR_DD35893 | Sodium transporter HTK1-like | 1,101 | 48759294-48760394 | 0 |
| ORF30 | GOBAR_DD35892 | Sodium transporter HTK1-like | 771 | 48768255-48771199 | 2.52E-168 |
| ORF31 | GOBAR_DD35891 | Hypothetical protein B456_012G180400 | 345 | 48773804-48774148 | 2.32E-72 |
| ORF32 | GOBAR_DD35464 | Clathrin assembly protein at2g01600 | 1,869 | 48786666-48791242 | 0 |
| ORF33 | GOBAR_DD35465 | C2 domain-containing family protein | 618 | 48797176-48799073 | 1.87E-146 |
| ORF34 | GOBAR_DD35466 | Transmembrane protein 214a | 2,289 | 48801663-48809177 | 0 |
| ORF35 | GOBAR_DD35467 | Nudix hydrolase 25 | 522 | 48813668-48816028 | 6.74E-122 |
| ORF36 | GOBAR_DD35468 | Histone H1 | 2,688 | 48818599-48821974 | 0 |
| qVW-Bp2-2(ZHX57-ZHX70) | |||||
| ORF1 | GOBAR_DD29983 | Clathrin assembly protein at2g25430 | 1,176 | 48967190-48968365 | 0 |
| ORF2 | GOBAR_DD29982 | Probable RNA-dependent RNA polymerase 1 | 3,384 | 48971284-48977252 | 0 |
| ORF3 | GOBAR_DD29981 | zz-type zinc finger-containing protein isoform 2 | 270 | 48985805-48986074 | 6.68E-51 |
| ORF4 | GOBAR_DD29980 | Probable RNA-dependent RNA polymerase 1 isoform x1 | 3,681 | 48986741-48992222 | 0 |
| ORF5 | GOBAR_DD29979 | zz-type zinc finger-containing protein isoform 4 | 1,044 | 48999858-49003565 | 1.71E-175 |
| ORF6 | GOBAR_DD30816 | Hypothetical protein B456_012G184400 | 357 | 49027876-49028232 | 3.70E-64 |
| ORF7 | GOBAR_DD30817 | probable receptor-like protein kinase at1g67000-like | 2,994 | 49029729-49036596 | 0 |
| ORF8 | GOBAR_DD30818 | Outer membrane usher papc | 621 | 49041071-49042751 | 8.40E-106 |
| ORF9 | GOBAR_DD30819 | Choline ethanolaminephosphotransferase 1 | 1,473 | 49047365-49055503 | 0 |
| ORF10 | GOBAR_DD30820 | 6-phosphogluconate decarboxylating 3 | 456 | 49055866-49056437 | 7.77E-68 |
| ORF11 | GOBAR_DD30821 | Pentatricopeptide repeat-containing protein mitochondrial-like | 1,473 | 49059446-49060918 | 0 |
| ORF12 | GOBAR_DD30822 | UDP-glycosyltransferase 89a2-like | 1,398 | 49065306-49066703 | 0 |
| ORF13 | GOBAR_DD30823 | UDP-glycosyltransferase 89a2-like | 1,269 | 49068319-49069746 | 0 |
| ORF14 | GOBAR_DD30823 | UDP-glycosyltransferase 89a2-like | 1,626 | 49072481-49074228 | 0 |
| ORF15 | GOBAR_DD30824 | DNA glycosylase superfamily protein isoform 1 | 858 | 49079123-49082924 | 0 |
| ORF16 | GOBAR_DD30825 | Cytochrome p450 | 1,542 | 49085314-49087354 | 0 |
| ORF17 | GOBAR_DD30826 | Cytochrome p450 | 1,542 | 49089128-49092805 | 0 |
| ORF18 | GOBAR_DD30827 | Malectin receptor protein kinase family | 834 | 49094292-49096259 | 1.88E-40 |
| ORF19 | GOBAR_DD30828 | Nucleolar protein 14 | 2,922 | 49097609-49103888 | 0 |
| ORF20 | GOBAR_DD30829 | Truncated transcription factor cauliflower a-like | 747 | 49106526-49109903 | 1.03E-168 |