Table 1. Sequences inserted to foreign genomic context and their properties.
| Sample
number |
Genome location, hg38 | Gene
name |
Length,
bp |
GC,
% |
CpGs | H3K27Ac,
native location |
H3K27ac,
foreign location |
H3K27Me3,
native location |
|---|---|---|---|---|---|---|---|---|
| 1 | chr1:62435851-62436130 | USP1 | 280 | 59.6 | 15 | yes | no | no |
| 2 | chr1:77979434-77979693 | FUBP1 | 260 | 58 | 27 | yes | no | no |
| 3 | chr1:86913854-86914119 | HS2ST1 | 266 | 56.4 | 16 | yes | no | no |
| 4 | chr20:63473349-63473556 | - | 208 | 65 | 1 | no | no | yes |
| 5 | chr12:49033153-49033412 | - | 260 | 66.6 | 1 | no | yes | no |
| 6 | chr17:81127213-81127450 | - | 238 | 67.7 | 2 | no | yes | yes |
| 7 | chr2:227381301-227381590 | - | 290 | 26.6 | 1 | no | no | no |
| 8 | chr1:108505575-108505854 | - | 280 | 37.5 | 0 | no | no | no |
| 9 | chr19:50816997-50817284 | - | 288 | 51.7 | 0 | yes (only
GM12878) |
no | yes (in some
cells) |
| 10 | chrX:48988617-48988801 | - | 185 | 52 | 1 | no | no | no |