Table 7.
Assembled deltacoronavirus contigs divided into partial protein-coding genes identified using BLASTX and compared to the closest related deltacoronaviruses in the NCBI database.
| Length nucleotides | Percentage Identity nucleotides* | Percentage identity amino acids* | |
|---|---|---|---|
| Orf1a (NSP 3, 4, 5, 7, 8, 9 & 10) | 10650 | 51.3–60.2 | 41.2–55.2 |
| Orf1bStart (NSP 10, 12) | 1095 | 60.5–71.1 | 61.5–75.5 |
| Orf1b-pol (NSP 12) | 2076 | 67.4–73.2 | 76.6–81.9 |
| Orf1b (NSP11) | 1914 | 63.4–68.7 | 65.6–74.6 |
| Orf1b (NSP11 & 13) | 2619 | 58.6–65.4 | 58.1–67.5 |
| Spike-S1-S2 | 3702 | 56.5–61.5 | 48.8–59.2 |
| E | 261 | 53.6–71.6 | 40.7–74.4 |
| M | 654 | 56.4–70.2 | 53.2–78.9 |
| NS6 | 276 | 49.3–69.6 | 38.0–60.9 |
The table displays the percentage identity of nucleotides and amino acids of generated deltacoronavirus contigs to the closest related deltacoronaviruses in the NCBI database (Wigeon deltacoronavirus JQ065048). The percentage was determined using MEGA 6 software. *The highest percentage identity is indicated in boldface and was consistently found when compared to the Wigeon deltacoronavirus JQ065048.