Table 5.
Sequence of repair products from LHmKumLig
Deletion size | Sequence before repair | Sequence after repair | Microhomology region |
---|---|---|---|
12 bp | GAATTG−ATTGTTA | GAATTGTTA | ATTG |
60 bp | CCGCTTG−GTTACAA | CCGCTTGTTACAA | G |
134 bp | GTTGACCGC−CCGCCGCC | GTTGACCGCCGCC | CCGC |
661 bp | GGTTGCAAA−CAAATTG | GGTTGCAAATTG | CAAA |
LHmKumLig bacteria were transformed with Cla I-linearized DNA and the Luc- CarbR colonies were tested for deletions in pBestluc. Colonies were selected that contained a range in size of deletions and the pBestLuc was isolated from these bacteria and sequenced. The junctions of the deletion were identified and are shown above. The dash (−) in the ‘sequence before repair’ relates to the sequence between the microhomology regions in pBestluc. The microhomology regions are shown in bold.