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. Author manuscript; available in PMC: 2018 Oct 30.
Published in final edited form as: Nat Methods. 2018 Apr 30;15(6):455–460. doi: 10.1038/s41592-018-0002-6

Figure 1. A customized SV pipeline designed for long-read SV analysis.

Figure 1

(a) Overview of the Picky pipeline. Blue and light blue lines indicate the template and the complementary reads from nanopore 2D reads, while brown and light brown lines indicate different strands of nanopore 1D reads. * indicates non-default parameterization. (b) Read alignment summary and different classes of SVs detected by algorithmic design of Picky.