REAGENT or RESOURCE	SOURCE	IDENTIFIER
Deposited Data
Nup84 sub-complex of the Nuclear Pore complex	Shi et al., 2014	PDBDEV_00000001
Exosome complex	Shi et al., 2015	PDBDEV_00000002
Mediator complex	Robinson et al., 2015	PDBDEV_00000003
Lysine-linked Diubiquitin	Liu et al., 2018	PDBDEV_00000004
Human serum albumin domains in their native environment	Belsom et al., 2016	PDBDEV_00000005 PDBDEV_00000006 PDBDEV_00000007
3D Chromatin model of the first 4.5Mb of Chromosome 2L from the Drosophila Melanogaster genome	Trussart et al., 2015	PDBDEV_00000008
Ribosomal RNA small subunit methyltransferase A complexed with 16S ribosomal RNA	van Zundert et al., 2015	PDBDEV_00000014
Software and Algorithms
IMP	Russel et al., 2012	https://integrativemodeling.org
TADbit	Serra et al., 2017	http://sgt.cnag.cat/3dg/tadbit/
HADDOCK	Dominguez et al., 2003	https://haddock.science.uu.nl
XPLOR-NIH	Schwieters et al., 2018	https://nmr.cit.nih.gov/xplor-nih/
ROSETTA	Leaver-Fay et al., 2011	https://www.rosettacommons.org/software
Chimera	Pettersen et al., 2004	https://www.cgl.ucsf.edu/chimera/
ChimeraX	Goddard et al., 2018	https://www.cgl.ucsf.edu/chimerax/
PDBx/mmCIF dictionary	Fitzgerald et al., 2005 Westbrook, 2013	http://mmcif.wwpdb.org
IHM dictionary	This work	https://github.com/ihmwg/IHM-dictionary
PDB-Dev prototype system	This work	https://pdb-dev.wwpdb.org
Python Django Framework	Django Software Foundation	https://www.djangoproject.com
Bootstrap Framework	Bootstrap Core Team	https://getbootstrap.com
mmCIF dictionary software suite	RCSB PDB	https://sw-tools.rcsb.org/apps/MMCIF-DICT-SUITE/index.html
MAXIT software	RCSB PDB	https://sw-tools.rcsb.org/apps/MAXIT/index.html