Table 2. D-GENIES processing time and memory consumption for Ensembl datasets.
| Reference genome | Query genome | Elapsed time | Maximum RAM usage |
|---|---|---|---|
| Human1 (3.5 Gb) | Chimpanzee1 (3.4 Gb) | 67 min 14 s | 36 GB |
| Mouse1 (3.4 Gb) | Rat1 (3.0 Gb) | 39 min 54 s | 24 GB |
| Cow1 (2.6 Gb) | Sheep1 (2.5 Gb) | 43 min 3 s | 27 GB |
| A. thaliana2 (135 Mb) | A. lyrata2 (206 Mb) | 1 min 4 s | 2 GB |
| Poplar2 (417 Mb) | Vine2 (486 Mb) | 3 min 21 s | 8 GB |
| Brassica rapa2 (284 Mb) | Brassica rapa2 (284 Mb) | 2 min 52 s | 8.3 Gb |
Notes:
1
Ensembl 91 datasets.
2
Ensembl 38 datasets.