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. 2018 Jun 1;5:60. doi: 10.3389/fcvm.2018.00060

Table 1.

Genome-Wide Studies using the zebrafish model to validate the causality of candidate genes.

Genome-wide study Disease Gene(s) Zebrafish genetic tool Zebrafish phenotype References
(74): GWAS in 1,910 patients/3,630 controls DCM HSPB7 MO knockdown
TALEN knockout
Heart looping defects
Increased susceptibility to cardiomyopathy
(75, 76)
(77): GWAS in 1,590 patients/577 controls HF HSPB7
(78): GWAS in 1,179 patients/1,108 controls DCM BAG3 MO knockdown Cardiac and skeletal myopathy (79, 80)
(79): WES in one multigeneration family DCM BAG3
(81): WES in three multigeneration families DCM FLNC MO knockdown Abnormal cardiac function and structure Same study (80)
(82): WES on three unrelated probands AF KCNIP1 Overexpression
MO knockdown
Overexpression promotes AF Same study
(83): Combined genetic and proteomic GWAS of 4 cohorts with 17,692 samples LQTS VCL MO knockdown
Gene-Trap CRISPR/Cas9
Defective cardiac repolarization
Myocardial contractile dysfunction
Same study (84, 85)
(86): WES on three cases CAID SGOL1 MO knockdown Bradycardia Same study
(87): GWAS in 590 patients/732 controls DCM HBEGF, IK, SRA1 MO knockdown Myocardial contractile dysfunction Same study

Mentioned here are examples found by manual database analysis. The list might not be exhaustive.

AF, atrial fibrillation; CAID, Chronic atrial and intestinal dysrhythmia; DCM, dilated cardiomyopathy; GWAS, genome-wide association study; HF, heart failure; LQTS, long QT syndrome; MO, morpholino; WES, whole exon sequencing.