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. Author manuscript; available in PMC: 2019 Jul 1.
Published in final edited form as: Ann Hum Genet. 2018 Feb 27;82(4):206–215. doi: 10.1111/ahg.12245

Table 4.

Selected genes with suggestive p-values (<0.05) from multiple analyses

Gene Chr Position Band Sun-exposed Skin Non-Sun-exposed Skin SKAT
z-score p-value N Variants/Model N z-score p-value N Variants/Model N p-value N
SLPI 20 43881680–43881682 20q13.12 2.96 0.003 1/47 −2.06 0.039 3/77 0.004 1
ZNF337 20 25655765–25666737 20p11.1 −2.65 0.008 1/82 −2.65 0.008 1/28 0.032 4
ARFIP1 4 153791955–153802203 4q31.3 −2.21 0.027 1/15 −2.21 0.027 1/14 0.027 1
TMEM8B 9 35829222–35854844 9p13.3 −2.53 0.011 1/15 NA NA NA 0.004 5
TOR3A 1 179051112–179065129 1q25.2 −2.25 0.025 1/20 NA NA NA 0.043 2
MLXIPL 7 73010191–73020440 7q11.23 −2.62 0.009 3/16 −2.76 0.006 5/48 0.679 6
NAAA 4 76836110–76862005 4q21.1 2.73 0.006 4/46 2.63 0.009 3/31 0.263 8
ALDH16A1 19 49956613–49973578 19q13.33 −2.70 0.007 3/21 −2.30 0.022 2/58 0.423 14
CDRT4 17 15341161–15341332 17p12 2.56 0.010 2/23 2.67 0.008 1/31 0.234 13

Boldface represents p-values < 0.05.

Number of SNPs included in the prediction model for that gene available in the summary statistics/Number of SNPs used to construct the prediction model for the gene in the tissue of interest using the GTEx data.

Number of SNPs with frequency <0.05 in the gene of interest and included in the analysis. NA = gene was not available in this analysis