Table 1.
Olive pollen superoxide dismutase (SOD) sequences retrieved from transcriptomic and genomic databases
| Gene name | Type | Transcriptome code a |
Genome code b |
Arabidopsis orthologue (gene name)/Identity (%)c | Length (aa) | Mw (Da)/pI | Cellular localization |
|---|---|---|---|---|---|---|---|
| OeCSD1.1A | Cu,Zn | po11_olive_011703 | OE6A103554T1 | At1g08830 (AtCSD1)/83 | 152 | 15,306.96/5.76 d-e | Cytosol |
| OeCSD1.1B | Cu,Zn | po11_olive_018096 | OE6A103554T1 | At1g08830 (AtCSD1)/78 | 144 | 14,521.15/6.09 d-e | Cytosol |
| OeCSD1.2 | Cu,Zn | po11_olive_018137 | OE6A068806T1 | At1g08830 (AtCSD1)/83 | 152 | 15,232.96/5.93 d-e | Cytosol |
| OeCSD1.3 | Cu,Zn | po11_olive_027139 | OE6A101614T3 | At1g08830 (AtCSD1)/82 | 152 | 15,200.83/5.76 d-e | Cytosol |
| OeCSD2 | Cu,Zn | po11_olive_021051 po11_olive_016542 |
OE6A004775T3 | At2g28190 (AtCSD2)/63 | 230 | 23,426.38/6.23 d 23,434.39/6.23 e |
Chloroplast |
| OeCSD3 | Cu,Zn | po11_olive_018653 | OE6A038482T1 | At5g18100 (AtCSD3)/75 | 157 | 15,944.81/6.53 d 16,045.98/6.53 e |
Peroxisome |
| OeFSD2 | Fe | po11_olive_023570 | OE6A023256T3 | At5g51100 (AtFSD2)/64 | 306 | 35,002.29/5.40 d 35,051.27/5.24 e |
Chloroplast |
| OeMSD1 | Mn | po11_olive_008559 | OE6A054770T1 | At3g10920 (AtMSD1)/78 | 228 | 25,501.22/6.71 d-e | Mitochondria |
a Transcript codes from the olive (cv. ‘Picual’) pollen transcriptome database (http://reprolive.eez.csic.es)
b Transcript codes from the olive (cv. ‘Farga’) genome database (http://denovo.cnag.cat/genomes/olive/)
c Identity (%) between the olive SOD amino acid sequences and the corresponding Arabidopsis orthologues
d-e Molecular weight (Da) and isoelectric point (pI) referred to the transcriptome (d) and genome (e) SOD amino acid sequences, respectively