Table 4.
The enriched pathways of top 3 modules.
Module | Term | P value | FDR | Genes |
---|---|---|---|---|
Module 1 | Cell cycle | 2.66E − 08 | 1.96E − 05 | CCNB1, CDK1, CCNB2, BUB1, TTK, PTTG1, and CDC25C |
ATP binding | 3.86E − 07 | 3.59E − 04 | CDK1, KIF4A, NEK2, KIF18B, TTK, CENPE, PBK, KIF2C, BUB1, TOP2A, MELK, TRIP13, and KIF20A | |
Kinesin, motor region, and conserved site | 1.54E − 06 | 0.0016579 | KIF2C, KIF4A, KIF18B, CENPE, and KIF20A | |
Kinesin, motor domain | 2.30E − 06 | 0.00247205 | KIF2C, KIF4A, KIF18B, CENPE, and KIF20A | |
p53 signaling pathway | 3.59E − 06 | 0.002649002 | CCNB1, CDK1, CCNB2, RRM2, and GTSE1 | |
| ||||
Module 2 | Cytochrome P450, conserved site | 4.98E − 15 | 3.11E − 12 | CYP3A4, CYP4A11, CYP2B6, CYP2C8, CYP26A1, CYP2A6, and CYP1A2 |
Cytochrome P450 | 9.23E − 15 | 5.74E − 12 | CYP3A4, CYP4A11, CYP2B6, CYP2C8, CYP26A1, CYP2A6, and CYP1A2 | |
Monooxygenase | 3.58E − 14 | 2.84E − 11 | CYP3A4, CYP4A11, CYP2B6, CYP2C8, CYP26A1, CYP2A6, and CYP1A2 | |
Organelle membrane | 6.92E − 14 | 3.79E − 11 | CYP3A4, CYP4A11, CYP2B6, CYP2C8, CYP26A1, CYP2A6, and CYP1A2 | |
Metal ion-binding site: iron (heme axial ligand) | 8.64E − 14 | 6.13E − 11 | CYP3A4, CYP4A11, CYP2B6, CYP2C8, CYP26A1, CYP2A6, and CYP1A2 | |
| ||||
Module 3 | Metal-thiolate cluster | 2.15E − 17 | 1.80E − 14 | MT1M, MT2A, MT1E, MT1H, MT1G, MT1X, MT1F |
Metallothionein, vertebrate, and metal binding site | 2.35E − 17 | 1.91E − 14 | MT1M, MT2A, MT1E, MT1H, MT1G, MT1X, and MT1F | |
Metallothionein, vertebrate | 5.17E − 17 | 4.19E − 14 | MT1M, MT2A, MT1E, MT1H, MT1G, MT1X, and MT1F | |
Metallothionein domain | 5.17E − 17 | 4.19E − 14 | MT1M, MT2A, MT1E, MT1H, MT1G, MT1X, and MT1F | |
Metallothionein superfamily, eukaryotic | 5.17E − 17 | 4.19E − 14 | MT1M, MT2A, MT1E, MT1H, MT1G, MT1X, and MT1F |