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. Author manuscript; available in PMC: 2018 Jun 12.
Published in final edited form as: Virology. 2016 Aug 10;497:314–322. doi: 10.1016/j.virol.2016.08.002

Table 4.

Beta (β)-HPV DNA prevalence detected on the surface of PeIN I–III cases and the normal genital skin of PeIN cases and controls, at the time of lesion detection (index visit), 6, and 12 months prior to lesion detection

HPV species/type Controls
n=10
PeIN
n=5


Normal genital skin Normal genital skin PeIN



12mo prior 6mo prior Index visit 12mo prior 6mo prior Index visit Index visit



No. (%) No. (%) No. (%) No. (%) No. (%) No. (%) No. (%)
Any β-HPV type 8 (80.0) 8 (80.0) 5 (50.0) 4 (80.0) 5 (100) 5 (100) 2 (40.0)
 β1
  Any β1 7 (77.8) 6 (60.0) 4 (40.0) 4 (80.0) 4 (80.0) 3 (60.0) 2 (40.0)
  HPV5 4 (44.4) 3 (30.0) 2 (20.0) 2 (40.0) 3 (60.0) 3 (60.0) 0 (0)
  HPV8 4 (44.4) 3 (30.0) 2 (20.0) 1 (20.0) 2 (40.0) 1 (20.0) 0 (0)
  HPV12 2 (22.2) 1 (10.0) 1 (10.0) 2 (40.0) 1 (20.0) 1 (20.0) 0 (0)
  HPV14 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 1 (20.0) 0 (0)
  HPV19 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0)
  HPV20 0 (0) 1 (10.0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0)
  HPV21 0 (0) 0 (0) 0 (0) 1 (20.0) 1 (20.0) 1 (20.0) 2 (40.0)
  HPV24 2 (22.2) 1 (10.0) 1 (10.0) 1 (20.0) 0 (0) 0 (0) 0 (0)
  HPV25 0 (0) 0 (0) 1 (10.0) 0 (0) 0 (0) 0 (0) 0 (0)
  HPV36 0 (0) 1 (10.0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0)
  HPV47 5 (55.6) 6 (60.0) 3 (30.0) 1 (20.0) 0 (0) 1 (20.0) 0 (0)
  HPV93 1 (11.1) 1 (10.0) 2 (20.0) 0 (0) 0 (0) 0 (0) 0 (0)
 β2
  Any β2 8 (88.9) 5 (50.0) 3 (30.0) 4 (80.0) 5 (100) 3 (60.0) 2 (40.0)
  HPV9 2 (22.2) 2 (20.0) 2 (20.0) 1 (20.0) 1 (20.0) 0 (0) 1 (20.0)
  HPV15 1 (11.1) 0 (0) 0 (0) 0 (0) 1 (20.0) 0 (0) 0 (0)
  HPV17 1 (11.1) 1 (10.0) 0 (0) 2 (40.0) 3 (60.0) 1 (20.0) 1 (20.0)
  HPV22 3 (33.3) 1 (10.0) 2 (20.0) 1 (20.0) 1 (20.0) 0 (0) 0 (0)
  HPV23 2 (22.2) 2 (20.0) 2 (20.0) 2 (40.0) 2 (40.0) 2 (40.0) 0 (0)
  HPV37 1 (11.1) 1 (10.0) 1 (10.0) 1 (20.0) 0 (0) 0 (0) 0 (0)
  HPV38 3 (33.3) 1 (10.0) 2 (20.0) 1 (20.0) 2 (40.0) 2 (40.0) 1 (20.0)
  HPV80 0 (0) 0 (0) 0 (0) 1 (20.0) 0 (0) 0 (0) 1 (20.0)
 β3
  Any β3 2 (22.2) 1 (10.0) 0 (0) 1 (20.0) 0 (0) 0 (0) 0 (0)
  HPV49 1 (11.1) 1 (10.0) 0 (0) 1 (20.0) 0 (0) 0 (0) 0 (0)
  HPV75 2 (22.2) 0 (0) 0 (0) 1 (20.0) 0 (0) 0 (0) 0 (0)
  HPV76 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0)
 β4
  HPV92 0 (0) 0 (0) 0 (0) 1 (20.0) 1 (20.0) 1 (20.0) 0 (0)
 β5
  HPV96 0 (0) 0 (0) 0 (0) 1 (20.0) 0 (0) 0 (0) 0 (0)
Multiple β-HPV types
 ≥2 types 7 (70.0) 5 (50.0) 3 (30.0) 4 (80.0) 4 (80.0) 2 (40.0) 1 (20.0)
α-HPV typea
  HPV16/18 1 (10.0) 1 (10.0) 1 (10.0) 1 (20.0) 1 (20.0) 2 (40.0) 2 (40.0)

Note: Sample sizes change depending on specimen availability and validity of HPV results.

a

Surface of normal genital skin and EGL specimens were evaluated for α-HPV using Linear Array