Table 1.

Throughput and quality of Illumina sequencing of the L. edodes transcriptome.

Samples	Raw data		DynamicTrim dataa		LengthSort datab
	Mycelium	Fruiting body	Mycelium	Fruiting body	Mycelium	Fruiting body
Total reads	33,810116	37,248796	33,810116	37,248,796	27,646,278	30,109,768
Total length (bp)	3,414,821,716	3,762,128,396	2,464,553,530	2,691,940,823	2,296,017,777	2,484,920,543
Avg. length	101	101	72.91	72.26	83.06	82.50

^aQuality value: each read was trimmed individually based on a quality score of less than 20.

^bStandard minimum read length: reads from which low-quality regions were trimmed, and reads with 25 base pairs (bp) were filtered out.