Table 1.
Samples | Raw data | DynamicTrim dataa | LengthSort datab | |||
---|---|---|---|---|---|---|
Mycelium | Fruiting body | Mycelium | Fruiting body | Mycelium | Fruiting body | |
Total reads | 33,810116 | 37,248796 | 33,810116 | 37,248,796 | 27,646,278 | 30,109,768 |
Total length (bp) | 3,414,821,716 | 3,762,128,396 | 2,464,553,530 | 2,691,940,823 | 2,296,017,777 | 2,484,920,543 |
Avg. length | 101 | 101 | 72.91 | 72.26 | 83.06 | 82.50 |
aQuality value: each read was trimmed individually based on a quality score of less than 20.
bStandard minimum read length: reads from which low-quality regions were trimmed, and reads with 25 base pairs (bp) were filtered out.