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. 2018 Mar 10;121(1):87–104. doi: 10.1038/s41437-018-0058-1

Table 2.

Structure of the Corymbia citriodora subsp. variegata (CCV) terpene synthase physical clusters and the Eucalyptus grandis clusters which are syntenic to CCV

Speciesa Subfamily Chromosome TPS genes Position (bp) Span (bp) Intervening genes Internal clusteringb
CCV TPS-a Chr3 9 29,395,680 3,598,941 202 1(9)2(1)1(22)3(2)1(168)1
Egr TPS-a Chr3 3 47,928,331 1,606,854 64 1(2)1(62)1
CCV TPS-a Chr4 3 11,823,925 14,705 0 N/A
CCV TPS-a Chr4 2 18,100,282 23,876 0 N/A
Egr TPS-a Chr4 5 19,896,024 246,197 7 1(2)3(5)1
CCV TPS-a Chr5 4 16,525,672 1,219,850 68 1(68)3
CCV TPS-a Chr6 6 33,461,887 106,929 0 N/A
Egr TPS-a Chr6 10 42,991,263 321,452 0 N/A
CCV TPS-a Chr7 3 2,183,056 809,251 59 1(58)1(1)1
CCV TPS-a Chr7 2 14,463,251 1,761,379 105 1(105)1
CCV TPS-b1 Chr1 8 22,285,470 1,866,767 103 1(64)2(1)2(36)1(1)1(1)1
Egr TPS-b1 Chr1 7 17,720,921 1,286,126 50 1(3)4(1)1(46)1
CCV TPS-b1 Chr2 2 2,027,307 13,692 0 N/A
CCV TPS-b1 Chr4 2 8,861,360 169,636 5 1(5)1
Egr TPS-b1 Chr4 8 16,009,931 217,347 7 1(1)1(1)2(4)2(1)2
CCV TPS-b1 Chr5 3 41,952,144 3,787,929 215 1(192)1(23)1
CCV TPS-b1 Chr8 3 29,799,505 47,398 3 1(1)1(2)1
CCV TPS-b2 Chr10 3 13,605,402 38,144 1 2(1)1
CCV TPS-b2 Chr11 5 23,810,145 420,788 25 2(25)3
Egr TPS-b2 Chr11 9 10,288,308 1,164,219 33 3(31)1(1)4(1)1
CCV TPS-f Chr4 3 7,135,889 385,574 31 1(31)2
Egr TPS-f Chr4 7 12,270,273 287,241 2 3(2)4
CCV TPS-g Chr2 2 19,657,471 29,412 2 1(2)1
CCV TPS-g Chr5 3 44,341,209 100,371 2 1(2)2
Egr TPS-g Chr5 12 62,540,499 1,272,677 25 3(2)3(2)1(19)1(1)1(1)3

a Egr indicate TPS clusters from E. grandis syntenic with the CCV TPS cluster directly above. Loci with only a single TPS gene are not shown

b Structure of the gene cluster, with non-TPS genes indicated by brackets. N/A indicates no intervening genes