TABLE 2 .
Summary table for percent collection of specimens, detectable DNA recovery, and Good's coverage during sequencing
| Specimen type |
Collection success rate (%)a |
Detectable DNA recovery (%) |
Median Good's coverage (range) |
|---|---|---|---|
| Rectal swabs | 97 | 99 | 0.98 (0.96–0.99)b |
| Naris swabs | 98 | 100 | 1.00 (0.99–1.00)c |
| Antecubital swabs | 98 | 42 | 0.99 (0.98–1.00)d |
| Stool | 31 | 100 | 0.99 (0.97–1.00)b |
a
Rectal swab collection success was based on collection of at least 1 swab.
b
Sequencing depth of 1,995.
c
Sequencing depth of 13,080.
d
Sequencing depth of 17,231.