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. 2018 Jun 14;8:9141. doi: 10.1038/s41598-018-27287-3

Table 2.

Inferred tasks for each archetype in the Escherichia coli proteome, along with subcellular localization labels.

Archetype (Vertex) Inferred tasks Subcellular localization Enriched GO-annotations
Cation transmembrane transporter;
Blue (V1) Transporting Integral Membrane Active transmembrane transporter;
Anion transmembrane transport.
Red (V2) Polysaccharyde, Binding, Catalysis Outer Membrane and Outer Membrane Bounded Periplasmic Porin activity;
Polysaccharide metabolic process;
Hydrolase activity;
Molecular function regulator.
Green (V3) Regulation Cytoplasm Regulation of the metabolic process;
Regulation of biological process.