Table 1.

Statistics of the read alignments in the RNA-Seq study

Sample name	Raw reads	Clean reads	clean bases	Error rate (%)	Q20(%)	Q30(%)	GC content(%)
CK_R1	102,609,352	100,129,870	15.02G	0.01	97.57	93.83	52.22
CK_R2	102,837,492	100,135,724	15.02G	0.01	97.59	93.82	52.55
CK_R3	119,750,698	116,752,212	17.51G	0.01	97.66	93.98	52.15
SY_R1	108,004,232	104,861,548	15.73G	0.01	97.56	93.79	52.69
SY_R2	138,500,332	133,956,886	20.09G	0.01	97.65	93.97	52.72
SY_R3	108,136,544	104,207,142	15.63G	0.01	97.62	93.89	53.65