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. 2018 Jun 15;19:461. doi: 10.1186/s12864-018-4846-z

Table 1.

Summary of transcriptome sequencing data from leaves of M. halliana under three Fe deficiency timepoints

Samples Raw Reads Clean Reads Mapped Reads Q20 (%) GC content (%)
T1_rep1 38,249,468 37,405,176 26,445,784 (70.7%) 97.09 47.16
T1_rep2 37,637,288 36,841,980 25,785,714 (69.99%) 97.18 46.95
T2_rep1 46,148,652 44,139,498 31,987,790 (72.47%) 97.16 46.89
T2_rep2 36,774,908 35,150,068 25,248,424 (71.83%) 97.51 46.99
T3_rep1 42,471,554 40,785,670 29,900,697 (73.31%) 97.53 47.43
T3_rep2 34,886,520 33,339,474 24,275,046 (72.81%) 97.61 47.05

Q20% is the proportion of the nucleotide quality value larger than 20; GC content is proportion of guanidine and cytosine nucleotides among the total nucleotides