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. 2018 Jun 15;13(6):e0199187. doi: 10.1371/journal.pone.0199187

Table 1. Citrus NF-Y transcription factor encoded genes.

Name Locus (Phytozome) Locus (CAP) C. clementina ortholog A. thaliana ortholog Chromosome location Polypeptide length (MW) pI GRAVY Predicted subcellular location
CsNF-YA1 orange1.1g019036m Cs2g30350 Ciclev10015808m NF-YA1 NF-YA9 chr2: 29,712,980..29,717,207 347 (37.2kDa) 8.26 -0.964 nucleus
CsNF-YA2 orange1.1g021081m Cs6g13560 Ciclev10012232m NF-YA2 NF-YA10 chr6: 14,987,576..14,992,571 317 (34.6kDa) 9.27 -0.597 nucleus
CsNF-YA3 orange1.1g019782m Cs1g17780 Ciclev10026020m NF-YA3 NF-YA8 NF-YA5 NF-YA6 chr1: 20,916,460..20,920,299 336 (36.7kDa) 8.67 -0.617 nucleus
CsNF-YA4 orange1.1g026474m Cs2g09780 Ciclev10016491m NF-YA4 NF-YA7 chr2: 7,234,224..7,238,903 238 (26.5kDa) 9.15 -0.733 extracellu-lar
CsNF-YA5 orange1.1g019764m Cs7g01720 Ciclev10032207m - chr7: 461,288..464,375 336 (36.8kDa) 9.54 -0.749 nucleus
CsNF-YA6 orange1.1g017825m Cs9g12370 Ciclev10005144m - chr9: 10,757,085..10,763,538 365 (39.9kDa) 9.44 -0.723 nucleus
CsNF-YB1 orange1.1g045289m orange1.1t03346 Ciclev10027508m - chrUn: 51,410,005..51,410,973 71 (8.0kDa) 4.79 -0.58 chloroplast
CsNF-YB2 orange1.1g027605m orange1.1t03346 Ciclev10027508m - chrUn: 51,410,005..51,410,973 221 (24.1kDa) 6.33 -0.725 nucleus
CsNF-YB3 orange1.1g036580m Cs4g08780 Ciclev10009623m NF-YB3 NF-YB2 chr4: 5,787,274..5,788,494 186 (20.2kDa) 6.53 -0.788 nucleus
CsNF-YB4 orange1.1g045194m - Ciclev10003157m NF-YB4 - 157 (17.6kDa) 8.37 -0.947 nucleus
CsNF-YB5 orange1.1g044287m Cs9g04610 Ciclev10006769m - chr9: 2,565,158..2,565,691 188 (20.9kDa) 5.43 -0.84 nucleus
CsNF-YB6 orange1.1g026469m Cs2g01680 Ciclev10016498m NF-YB6 chr2: 563,303..566,657 238 (26.5kDa) 6.72 -0.668 mitochon-drion
CsNF-YB7 orange1.1g047516m Cs1g09850 Ciclev10003558m NF-YB7 chr1: 11,604,325..11,604,969 214 (24.1kDa) 5.80 -1.014 nucleus
CsNF-YB8 orange1.1g030647m Cs6g04240 Ciclev10012920m NF-YB8 NF-YB10 chr6: 4,871,183..4,873,746 174 (19.0kDa) 5.67 -0.833 nucleus
CsNF-YB9 orange1.1g038325m Cs4g08720 Ciclev10010391m NF-YB9 chr4: 5,742,982..5,745,273 231 (25.4kDa) 6.05 -0.542 nucleus
CsNF-YB10 orange1.1g030547m Cs7g27760 Ciclev10032893m NF-YB8 NF-YB10 chr7: 28,445,326..28,456,064 175 (18.9kDa) 5.81 -0.685 nucleus
CsNF-YB11 orange1.1g038014m Cs5g32730 Ciclev10024294m - chr5: 33,945,582..33,946,004 140 (15.6kDa) 5.62 -0.805 nucleus
CsNF-YC1 orange1.1g026901m orange1.1t02576 Ciclev10032646m NF-YC1 NF-YC4 chrUn: 39,384,571..39,387,608 231 (25.0kDa) 5.05 -0.455 nucleus
CsNF-YC2 orange1.1g024265m orange1.1t03257 Ciclev10007003m NF-YC2 chrUn: 50,081,198..50,085,450 270 (30.2kDa) 5.81 -0.644 nucleus
CsNF-YC3 orange1.1g019814m Cs3g13490 Ciclev10002193m NF-YC3 NF-YC9 chr3: 17,935,028..17,937,988 335 (37.3kDa) 9.24 -0.641 nucleus
CsNF-YC4 orange1.1g047870m Cs5g03650 Ciclev10023545m - chr5: 1,967,345..1,967,909 102 (11.2kDa) 9.61 -0.034 chloroplast
CsNF-YC5 orange1.1g045847m Cs6g18220 Ciclev10013435m NF-YC12 chr6: 18,422,446..18,425,136 237 (27.1kDa) 5.24 -0.526 nucleus